| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0044 |
|---|
| Symbol | |
|---|
| ID | 6978753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 44932 |
|---|
| End bp | 45882 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643394755 |
|---|
| Product | signal peptide peptidase SppA, 36K type |
|---|
| Protein accession | YP_002279573 |
|---|
| Protein GI | 209547656 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.316268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.230689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTT CGATCATCGC CGATCGCCGG CGGCTGCGCC GCAAGCTCGG CTTCTGGCGT
ATCGTCGCGG TCGCCCTCAT CGTGGCGCTT GGCCTGGCCT TTTACAGCTT CGCCTTCGGC
AATGCCGGAA CGGAGCGCCC GCATATCGCC CATGTGACGA TATCGGGGCT GATCGTCGAC
GATGACGAGC TTCTAGAGCG GCTGAAGAAG GTCGAGACCA GCGATCAGGT GAAGGCCGCG
GTGATTTCGA TCTCCTCGCC CGGCGGCACC ACCTATGGCG GCGAAAAGAT CTTCAAGGCG
ATCCGCGCGA TCGCAGCCAA GAAACCCGTC GTCTCCGACG TGCGCACGCT TGCCGCCTCC
GCCGGCTACA TGATCGCCAC CGCCGGCGAT ACGATCATTG CCGGCGACAG CTCGATCACC
GGCTCGATCG GCGTCATCTT CCAGTATCCG CAGATCCAGC CGCTGCTCGA CAAGATCGGC
GTCTCGCTGC AGGAGATCAA ATCCTCGCCG CTGAAGGCCG AGCCCTCGCC GTTCCATGAA
GCGAGCGAGG AGGCCAAGGC AATGATCCGC AACATGGTGG TCGACAGCTA TAACTGGTTC
GTCGATCTGG TCGCCGACCG GCGCAAGCTG CCGCGCGACG AGGTGCTGAA ACTCGCCGAC
GGCACGATCT ATACCGGCCG CCAGGCGCTC AAGGTGAAAC TCGTCGATAC GATCGGCGGC
GAGCCGGAAA TCCGGGCCTA TCTCAAATCG CGCGGCGTCG ACGCCGACCT GCCGATGGTC
GACTGGGACA AGAAGAGCAA TACGCCCTTT CTGCTCGCTG GGGCTGTTTC GCGGTTGATT
ACGATCTTCG GTTATGATGA TCTCTTGAAA GGCCAGGATA TCAATGGAAT CCTGCCCCCA
AAGTTGCTTC TTGACGGGCT GCTTTCAGTT TGGCAGGTTG GCCGCGATTG A
|
|---|
| Protein sequence | MDSSIIADRR RLRRKLGFWR IVAVALIVAL GLAFYSFAFG NAGTERPHIA HVTISGLIVD
DDELLERLKK VETSDQVKAA VISISSPGGT TYGGEKIFKA IRAIAAKKPV VSDVRTLAAS
AGYMIATAGD TIIAGDSSIT GSIGVIFQYP QIQPLLDKIG VSLQEIKSSP LKAEPSPFHE
ASEEAKAMIR NMVVDSYNWF VDLVADRRKL PRDEVLKLAD GTIYTGRQAL KVKLVDTIGG
EPEIRAYLKS RGVDADLPMV DWDKKSNTPF LLAGAVSRLI TIFGYDDLLK GQDINGILPP
KLLLDGLLSV WQVGRD
|
|---|
| |