Gene Rleg2_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0019 
Symbol 
ID6978728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp17882 
End bp19291 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content63% 
IMG OID643394730 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_002279548 
Protein GI209547631 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[TIGR00089] RNA modification enzyme, MiaB family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.43689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG ACAACGCCCT CCTTCAGGCC CCGGAGCTGA CGCTCCGCGA TGGTTCCAAC 
AGCCGCAAGG TCTTCATCAA GACCTATGGC TGCCAGATGA ACGTCTATGA TTCCACGCGC
ATGAGCGATG CGCTCGCCCG CGATGGCTAT GAACCGACCG AAGATATGGA AGAGGCGGAC
CTCGTTCTGC TCAACACCTG CCATATACGA GAGAAGGCGG CCGAGAAGGT CTATTCGGCG
CTCGGACGGC TGCGCGACAT GAAAAAGAAG AAGGCGGCGG ACGGACGGGA GATGATGATC
GGCGTTGCCG GCTGCGTCGC CCAGGCCGAA GGCGAGGAGA TCCTGCGCCG GGCGCCCGCC
GTCGACGTCG TCATCGGCCC GCAGACCTAT CACCGCCTGC CGGAGGCGCT GCGCCGGGCC
AAGGAGGGCC AGCGCGTCGT CGATACGGAC TATGCGATCG AGGACAAGTT CGAGCATCTG
CCGATTGCCG AGAGCCGGAA GATCCGCGCC CGCGGCGTCA CCGCCTTCCT GACGGTGCAG
GAGGGCTGCG ACAAGTTCTG CACCTTCTGC GTTGTGCCCT ATACGCGCGG CTCGGAAGTG
TCGCGGCCGG TTGCCCAGAT CGTCGAGGAA GCCGAAAAGC TCGTCGAGGG GGGCGTGCGC
GAGATCACCC TGCTCGGGCA GAACGTCAAT GCCTGGCACG GCGCCGGGCC GCGGGGCGAG
GCATGGAGCC TCGGCGACCT GCTCTACCGG CTTGCCGAGA TCCCCGGCCT TGCGCGGCTG
CGCTACACCA CCAGCCATCC GCGCGACATG GACGACCGGC TGATCGACGC CCATCGCGAT
CTCCGGGCGC TGATGCCCTA TCTGCACTTG CCGGTGCAAT CGGGCTCCGA CCGCATCCTC
AAAGCCATGA ACCGGCGCCA CACGGCAGCC GAATATCTCA GCCTGATTGC GCGCATCCGC
ACGGTGCGCC CCGATATCGC GCTGTCGGGC GATTTCATTA CCGGCTTTCC GGGGGAGACA
GACGCCGATT TTGAGGATAC ACTCAGGCTT GTGGAGGAGG TCCGTTATGC ACAGGCCTTT
TCGTTCAAAT ACTCGACACG GCCGGGCACG CCCGGCGCGG AACTGAAGGA CCAGGTGCCG
GAACAGATCA AGGCAGAACG GCTGGAACGC CTGCAAGCGC TTCTCCTGAA GCAGCAGCAG
GAATTTGCCG AATCCTGCAT CGGCAAAGAG ATCGACCTGT TGCTGGAAAA GCCCGGTCGC
ATGCCGGAAC AGCTGATCGG CCGTTCTCCC TGGCTTCAAT CCGTGAATGT TGATGCAAAA
GCATCGCAAA TCGGTGACAT TATTAAAGTG CGAATCACCG GAACCGGAAA CAACAGCCTG
TTTGCCGAAC GCGCAGAGGC TGCGGTTTAA
 
Protein sequence
MTQDNALLQA PELTLRDGSN SRKVFIKTYG CQMNVYDSTR MSDALARDGY EPTEDMEEAD 
LVLLNTCHIR EKAAEKVYSA LGRLRDMKKK KAADGREMMI GVAGCVAQAE GEEILRRAPA
VDVVIGPQTY HRLPEALRRA KEGQRVVDTD YAIEDKFEHL PIAESRKIRA RGVTAFLTVQ
EGCDKFCTFC VVPYTRGSEV SRPVAQIVEE AEKLVEGGVR EITLLGQNVN AWHGAGPRGE
AWSLGDLLYR LAEIPGLARL RYTTSHPRDM DDRLIDAHRD LRALMPYLHL PVQSGSDRIL
KAMNRRHTAA EYLSLIARIR TVRPDIALSG DFITGFPGET DADFEDTLRL VEEVRYAQAF
SFKYSTRPGT PGAELKDQVP EQIKAERLER LQALLLKQQQ EFAESCIGKE IDLLLEKPGR
MPEQLIGRSP WLQSVNVDAK ASQIGDIIKV RITGTGNNSL FAERAEAAV