Gene Rleg2_5562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5562 
Symbol 
ID6978656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1210338 
End bp1211537 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content64% 
IMG OID643394660 
Productamidohydrolase 
Protein accessionYP_002279478 
Protein GI209547560 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase
[TIGR02019] bacteriochlorophyll 4-vinyl reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.596197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCA TCGCTCAAAA CCCGCGCAGC AACGATCCGG TCGAAAAGGG CATCGCCGCC 
TATCTCGACG AGATCATCGC GCTTCGCCAC GACCTGCATC AATATCCGGA GCTTGCCTTT
CAGGAGCTGA GGACCAGCAA GCTCGTGGCA TCCCGCCTGT CCTCCTGGGG CTACGAGGTG
GTGACGGGCA TCGCCGGCAC CGGCATCGTC GCCACCTTGA GACGCGGTGA CGGTAAGAAG
CGGATCGGCA TTCGCGCCGA CTTGGACGCG CTGCCGATCG AGGAGGCGAC CGGACTTGCC
TATGCCAGCA GCAATCCCGG CGTCATGCAT GCCTGCGGTC ATGACGGCCA TACCGCCATC
CTGCTGGCGG CTGCCCGCTA TCTCGCAGAG AGCGGTCATT TCAGCGGCAC GTTGAGGCTG
ATCTTCCAGC CCGCCGAGGA AATCGGCGCC GGTGCCCGCA AGATGATCTC GGAAGGCCTG
TTCGAGCGGT TTCCCGTCGA TGCGGTCTTC GGTCTGCACA ACTGGCCGGG TGTGCCGACG
GGGCAATTCG GTTTCGTCGC TGGCCCGGCC ATGGCCTCGG TCGATCAGGC GGTCGTCAAA
ATCGTCGGCA AGGGCGGGCA TGGCGCCGAA CCGCACCGCG CCGTCGATCC GGTGCTCGCT
TCCGCCTCCT TCATCACCGC CCTGCAAAGC GTCGTCTCGC GCAATGTCGA TCCGCAGGAC
ATGGCGGTCG TCACGGTCGG CTCGATCCAT GCCGGCTCCG CCTCGAACGT CATCCCCGAG
AGCGTCGAGA TGAAGCTCAC CATGCGGGCC TTCAGCGAGA CGGTTCGCCA TCTGCTGCAG
GAACGTATTC CAGCCCTCGC GCGCGCCCAG GCCGAAAGCT TCGGCGCGGC GGCGGAGGTG
AATTATCGCC TCGGTTTTCC AGCCTTGGTC AATCATGCCA AAGAGACGGC ATTTGCCCGG
GACGTCGCCT ATGACGCACT TGGCCTTGCG GCGATCGAAA AGGATTTCCG GCCGAGAACC
GCGAGCGAGG ATTTTGCCTT CATGCTGCAG GCCAATCCCG GCAGCTACCT CTTCGTCGGC
AATGGCGACA GCGCGCCACT CCACAGCGCC CACTACAATT TCAACGACGC GATCATTGCA
CCCGCCGCCC GCTATTGGGT GCGGCTCGCC GAAACCTTCC TCATTGATGA CAACGGGTGA
 
Protein sequence
MDVIAQNPRS NDPVEKGIAA YLDEIIALRH DLHQYPELAF QELRTSKLVA SRLSSWGYEV 
VTGIAGTGIV ATLRRGDGKK RIGIRADLDA LPIEEATGLA YASSNPGVMH ACGHDGHTAI
LLAAARYLAE SGHFSGTLRL IFQPAEEIGA GARKMISEGL FERFPVDAVF GLHNWPGVPT
GQFGFVAGPA MASVDQAVVK IVGKGGHGAE PHRAVDPVLA SASFITALQS VVSRNVDPQD
MAVVTVGSIH AGSASNVIPE SVEMKLTMRA FSETVRHLLQ ERIPALARAQ AESFGAAAEV
NYRLGFPALV NHAKETAFAR DVAYDALGLA AIEKDFRPRT ASEDFAFMLQ ANPGSYLFVG
NGDSAPLHSA HYNFNDAIIA PAARYWVRLA ETFLIDDNG