| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5538 |
|---|
| Symbol | |
|---|
| ID | 6978632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 1189866 |
|---|
| End bp | 1190525 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643394637 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002279455 |
|---|
| Protein GI | 209547537 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.172396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACA CCTTTCTCGA ACAACTCTGG ATCGCCCGCT ACGTCATCAT CAACGGCATT
GGCATGACCG TATCGATCTC TCTGCTGGCC ATCCTCGCGG GGTCCGTCCT CGGCGTTTTC
GTCGGCCTGG CGCTCGTCTA TGGCAATGTT GTTTTGCGTG TCGCGGTGCG CGCCTATACC
GATATCATCC GCGGCACGCC GGTGCTCGTG CTGGTGCTGG CGAGCTACTA TGTCTCTGCC
GCCGTCGGTC TCGATCTCGG GCCGTTTTCA GCCGGCGTGC TCGCCCTTGC GATCTTCTGC
TCCTCGCATG TCGGCGAAAT CGTTCGCGGA GCGCTTCAGG CGATCCCGAA GGGGCAGACT
GAAGCGGCCA AGGCGATCGG CCTGACCTTT ACCCAGACCT TCACCTCGGT GCTGTGGCCG
CAGGCCATGC GCCAGTGCCT GCCGGCCTGG GTGAATACGG CGGCCGAGAT GGTCAAGGCC
TCGACGCTGC TCTCCGTCAT CGGCGTTGCC GAGCTTCTGC TGCGCACGCA GGAGATCATC
TCCCGCAATT TCATGAGCCT CCAGTTCTAT TTCCTGGCCG GCGGGCTCTA TTTCATTGTC
AACTACGGCA TCGAGCACTT CGGCAAATAT GTCGAGCGCA AGACCGCCCT GCCGTCCTGA
|
|---|
| Protein sequence | MSHTFLEQLW IARYVIINGI GMTVSISLLA ILAGSVLGVF VGLALVYGNV VLRVAVRAYT
DIIRGTPVLV LVLASYYVSA AVGLDLGPFS AGVLALAIFC SSHVGEIVRG ALQAIPKGQT
EAAKAIGLTF TQTFTSVLWP QAMRQCLPAW VNTAAEMVKA STLLSVIGVA ELLLRTQEII
SRNFMSLQFY FLAGGLYFIV NYGIEHFGKY VERKTALPS
|
|---|
| |