Gene Rleg2_5484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5484 
Symbol 
ID6978578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1132448 
End bp1133596 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content60% 
IMG OID643394584 
ProductABC transporter related 
Protein accessionYP_002279402 
Protein GI209547484 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.211283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.256732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTGG TTGTACTGGA CAAAATCTGC AAGACCTATG GAAACAGCTA CCATGCGATC 
AAGGATCTGA GCCTGACGAT CCATGATGGC GAGTTTCTGA TCCTGGTCGG TCCGTCCGGA
TGTGGAAAAT CGACCGCGCT CCGCATGATT GCCGGGCTTG AGGAAATCAG CAGCGGGACC
TTGAGCATCG GCGGTCAGGA CGTCGTCGAT CTCGCGCCGA AGGACCGGGA CATCGCCATG
GTCTTCCAGA GTTATGCGCT TTATCCGCAC ATGACAGTGT TCGACAACAT TGCCTTTTCG
ATGAAGCTGG CCGGAAAAAC CAAGGCCGAG CGAACCAAGC GCGTTCACGA GATTGCCAAG
ATCCTGCAGC TGGAAAGCCT GCTCGGCAAC AAGCCGGCCC AGCTTTCCGG CGGGCAGCGC
CAGCGTGTTG CAATGGGCCG CGCCATGGTC CGCGAGCCCG CGGCATTCCT GATGGATGAA
CCGCTTTCCA ACCTCGATGC TAAGCTGCGT GTGCAGATGC GCGCCGAGAT CGCCAGTTTG
CAGCGGCAGT TGGGCGTGAC GACGATTTAC GTGACGCATG ATCAGACCGA AGCTTTGACG
ATGGGCGATC GCGTCGCAGT GCTGAAGGGC GGCGTGCTCC AGCAGGTGGA CACGCCCAAG
GCCCTCTATC ACCGCCCGGT CAATGCGTTT GTCGCTGGCT TCATCGGCTC GCCGTCGATG
AACCTGTTCG AAGGGCGTCT GGAGGGCATG CGGATCCACT TGCCAGGCTT CTCCATCCCT
CTGTCCGACA GCGCCTTCGA GCGGGCTCCC GGCCTTTCCG CCTTCGAGGG GAAGGCGCTG
ATCTTTGGTG TCAGGCCCGA GGACCTCTAT GACAGCCGGT TGCCGTCCGG AGCCTCCTAT
CCGACGATCC CGGTTGTCGT GAAGTCGATC GAGGAGCTCG GCTCCGAGTT GATCGTGCAT
TTGAAGATCG AGGCGGTCCG CATCGACTCG GGCGACCCCG ATGCCGTCGA AGATTTGAGC
GGTGCCGCCA ACGCCGTCGC CCGCTTCGAG GCTGTCAGCG CGGTCGAGAC GGGCCAATCG
ATCAATCTGG CGATCGACCC GGCGAAACTG CACTTTTTCC ATCCTCAAAC ACACATGGCT
TTGAACTGA
 
Protein sequence
MAVVVLDKIC KTYGNSYHAI KDLSLTIHDG EFLILVGPSG CGKSTALRMI AGLEEISSGT 
LSIGGQDVVD LAPKDRDIAM VFQSYALYPH MTVFDNIAFS MKLAGKTKAE RTKRVHEIAK
ILQLESLLGN KPAQLSGGQR QRVAMGRAMV REPAAFLMDE PLSNLDAKLR VQMRAEIASL
QRQLGVTTIY VTHDQTEALT MGDRVAVLKG GVLQQVDTPK ALYHRPVNAF VAGFIGSPSM
NLFEGRLEGM RIHLPGFSIP LSDSAFERAP GLSAFEGKAL IFGVRPEDLY DSRLPSGASY
PTIPVVVKSI EELGSELIVH LKIEAVRIDS GDPDAVEDLS GAANAVARFE AVSAVETGQS
INLAIDPAKL HFFHPQTHMA LN