Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5446 |
Symbol | |
ID | 6978540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1089065 |
End bp | 1089778 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643394547 |
Product | GntR domain protein |
Protein accession | YP_002279365 |
Protein GI | 209547447 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0117781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCG CGGCCGACGC CGTTTCGAAC AGAGGCGCAA CGCGCTTCAG CGACATCATC TACGAGAAGA TCGTGGGGAT GATCGCCGAC GGCAATTTTC CGGTGAACGA ACGGCTGCCG TCGGAGACGA AGCTCGCCGC CGATTTCGGC GCTTCGCGGC CCGTCGTGCG CGAGGCGCTC GAGCGCTTGA GAGCCGATGG CCTGGTCGTT TCGCGCAAAG GCTCCGGCTC CTACGTCCGG CAAAGACCGG ATTCGTCGAT GCTGAAAATG GTGCCTGTGG GATCACTCGC CGATGTCCAG CGGTTTTTCG AATTCCGCGC CGGCCTCGAA GCCGAGGCGG CGGAGCTTGC CGCGCGAAAC TGGCAGCCGG CCGACAAGGA GAGGATATCG GCAGCGCTTC TTTCCATCGA GCAATGTCTG CGCAACGGAG AGCTCGGCGC CGAGGAGGAT CAGGCTCTGC ATGATGCCAT CGCCATGGCG ACCGGCAATC AGTTCCATAT CACCGTGCGC GAATGGTTCA GGCCGCATTT CGCCATCGGG CATTCCGTTA CGCGAAGCCT GAGCCTGAAA CGCACGCTGG AGCAAATCCG CAGCGTCCAG GACGAGCACG CGGTGATCGT GGAGGCGATC TTCGCACGGC GGGAAACCGA AGCGCACGAT GCGATGAAGA AACACATACT GAATGCTCGC GCCCGCATGT TCCAGGGCGT TTGA
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Protein sequence | MTFAADAVSN RGATRFSDII YEKIVGMIAD GNFPVNERLP SETKLAADFG ASRPVVREAL ERLRADGLVV SRKGSGSYVR QRPDSSMLKM VPVGSLADVQ RFFEFRAGLE AEAAELAARN WQPADKERIS AALLSIEQCL RNGELGAEED QALHDAIAMA TGNQFHITVR EWFRPHFAIG HSVTRSLSLK RTLEQIRSVQ DEHAVIVEAI FARRETEAHD AMKKHILNAR ARMFQGV
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