| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5436 |
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| Symbol | |
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| ID | 6978530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011368 |
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| Strand | - |
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| Start bp | 1077149 |
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| End bp | 1080028 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643394537 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_002279355 |
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| Protein GI | 209547437 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00800009 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGACAT CCCTCAAGAA GTCCCTGTTC TCAGGCCGTG CAGCAGAACT CGATGCGATG
GAATCCGCGT TCCGGGACGT TTACGGCGGC CGGCAACGCT CCATTCTTCT CGGGGCGGAA
GCAGGCGGTG GCAAGAGCCG GCTGGTCGAG GAGTTTGCCG ATCGACTGTC AGGCTGTGCG
CTGATCCTGA AGGGCGGCTG CATCGAGCAG CGAGAATCGG CATTGCCCTA TGCGCCGGTC
ACCGCCGTGC TGCATGAACT GGTTCAACTG CGCGGTGGGA CGGCGGCCCG ATCGCTTGTC
GGCGCCGCGA GTGCGCGCGA ACTGGCTTGG CTTCTTCCCG AATTCGGCGA AACCTCTGAA
CGGTTTGATG CGGGCATCGC AAGAGCGAGG CTGTTCGAGG CGTTGAGGAA GCTGTTCGAA
GAGCTCGCCC GGGAGATGCC GCTCGTCGTG GTCGTCGAAG ACATTCACTG GGCCGACCAG
GCCACTTGCG ATCTGCTTCG TTTCCTCACG ACGCGGCTGA AGAAAAGTCG GATGATGCTG
ATCGTCACCT ACCGACCTGA GGAGACCAGC GGCAGCAACG CGCTGCGAAC GACCATCGCG
GACCTCTCGC TGTCCGAGGG TGCCGAGATG CTGAAGCTTC CCCGCCTCAA GCGCGCCGAA
GTCGCCGCGC AGCTCGAGGG GCTGCTCGGG CGCCCGCCGA CACCCGCCGT CATCAATGAG
GTCCATGCGC GATGCTGCGG GATCCCGCTT TTCACGGAGG CGCTTATCGA TGCGAGCGGA
AGCTTGCGTA CTGATTTTCC CGGCTCGCTC AACGACTACC TGCTGAAAGG CGTCAGGGAG
ATACCGGCGT CGACGGCCGG CCTGTTGAAG GTGATGGCAC TTGGCGGTCC GCATATTGCG
CATGCGCTTC TTCGCAGCGT GGCGGATAAG TCCGACCTTG AATTAGCCGA ATTGCTGAAG
CCCGCAATTT TGACCGGGAT CCTGGTGCCG GATGGCGACG GATATGCGTT CCGCCATGCG
CTGATCCACG AAGCGGTGCG GGGTGACCTG ATTGCCGGCG AAAGGATGGC CATCCATCGC
GCCTATGCCG AAGTGCTCGA ACGCGGCCCG CTTCCGAGCT ACCGGGTTTG GCATTCCGTT
GCGCTCGCCC GCCACTGGCA CGGCGCCGGC CAAGCCGAAC CTTGCCTGCG ATGGGCGTGG
CAATCCGCCG TGGAAGCTGC TGCCACCTTC GCCTATGCAG ACCAGATGGA GATGCTGAAG
CTCGTGCTGG CAGCCTGGCC CGATGTCGAT CATGCGGCTG ACCTGATCGG CGCAGATCAT
TGCAGGGTGT TGGAACTTGC TGCCGATGCC GCTTGCTGGG CGGCGGAAGC CGAACAGGGA
CTGGCTTTTG TCGAACGCGC TCTCGCCGAA GTGGATGCCG AGCGCGACGG TGAGCAGCTG
GCAGCCCTTC TTCTGCAGCG CGCGGTGATG CGTCAGCACA CGCTTACCCC AGGTGAGATC
GCCGATCTTG AGCGAGCGCT CGATCACGCG GTCGCTCCCA CCAGGCTGCG CGCGGACGGA
CTGGGGCAGT TTTCCCGCGC GCTGATATTG CGGGGAGAAT TCGATCGCGC CAGGCTCTTG
GGCGACGAGT TAAAGGACCT GTCGGAGAGG CTCGATGACG AGGAATACCG CATCGAGGCA
CTGATCGTCG CGGCGTCCGT GGACATGGCC GCGGGCAACT CTCGCATCGA CGCCTTCTGG
AACGTGGCTA AGCGCGCCGG TCAGGCATCC ATCGGCCGGG TCGAGGTGCT GGCGGGCGCA
GCCCTGCTTC AAGCCCTGCT CGAGACAGGA GACTACGCTC AGATCATCGA CATCGGACCG
GCGATCTTTG CCCAGACCGT CGAATTCGGC CAGGCCCGGT ATATCGGGGC AATCGTGGGT
TCGCCCTTGT GCCGCGCCCT GCTCGCCGTC GGCCGCGTTT CCGAAGCCGT TGAGACATGC
GAACGGATGG CGGCATTGGA TCCGCTGCCG CTGGGGCTGG TTCATGTTTT CGAGTGTCAG
GCGGAGATCG CCCTGGTCCT GGGGGATTCG GATCGCGTTG CCGCAGCGGC AAGCGCCTCG
CGCGCTCTGC CACCCGGCCC CCAGGTCGCG GGCCGCATGA CGGCCAATCT TTTGCGGTTC
GACCTCGAAA GCACCGCGCT GGCGGGCGAT ATGGATCAAT CTGCGATCCT GATAAGATCG
GCTTCGACCC AGTTGGAGAA GCAAGGAGGC GTCTCCTGGC CGCTCTTGGC CTCTGCCATG
CGTGTCGCCA TCGACACGAA CCGGAAAGAT GTCGCCCAGC AGCTCGCGGA CCTCGCCGCT
CGGACCCCGT GCCGCAACGT GGTGGAGCAA GCCGAGAGGC TTACTGTCTC GGCCGAGATG
TCGCGCGCGA CGGTTTCCGA CCTCGATGCC TGGGAAGCGG CTGCCCAAAG TTGGGCTGAT
TTGAGCCAGC CCTTTCGGCA GGCATATGCC CTGATGCAGG CCGGGAGCGC TGCAGTGAAT
GCCGGCAAGC GCGCCAGGGG TGCAGACCAT TTCGGGCGAG CTGCGGATCT TGCCCATTCG
ATCGGCGCGC GCCTGCTTGC CAATCAAATC GAGACGCTGG CCGCAAAGGC CCGCATTGAT
CTGCGAGGCG GGAAAGAGGG CAGCACGCCG AAGGCGAAGC TTGGCCTGAC GGACCGGGAA
TTCGAGGTGC TCAGGCTTGT CGCCGCCGGA CAAAGCAATC GCGAGATCGC CGATAATCTG
TTCATCTCGT CGAAAACGGC GAGCGTTCAT GTCTCCAACA TCTTGAGCAA ACTCGCCGTC
CCCAGCCGCG GTGCTGCGGC CGCCATGGCC CACCGGCTCC GGATCGTTGA TCCGGCATAG
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| Protein sequence | MSTSLKKSLF SGRAAELDAM ESAFRDVYGG RQRSILLGAE AGGGKSRLVE EFADRLSGCA
LILKGGCIEQ RESALPYAPV TAVLHELVQL RGGTAARSLV GAASARELAW LLPEFGETSE
RFDAGIARAR LFEALRKLFE ELAREMPLVV VVEDIHWADQ ATCDLLRFLT TRLKKSRMML
IVTYRPEETS GSNALRTTIA DLSLSEGAEM LKLPRLKRAE VAAQLEGLLG RPPTPAVINE
VHARCCGIPL FTEALIDASG SLRTDFPGSL NDYLLKGVRE IPASTAGLLK VMALGGPHIA
HALLRSVADK SDLELAELLK PAILTGILVP DGDGYAFRHA LIHEAVRGDL IAGERMAIHR
AYAEVLERGP LPSYRVWHSV ALARHWHGAG QAEPCLRWAW QSAVEAAATF AYADQMEMLK
LVLAAWPDVD HAADLIGADH CRVLELAADA ACWAAEAEQG LAFVERALAE VDAERDGEQL
AALLLQRAVM RQHTLTPGEI ADLERALDHA VAPTRLRADG LGQFSRALIL RGEFDRARLL
GDELKDLSER LDDEEYRIEA LIVAASVDMA AGNSRIDAFW NVAKRAGQAS IGRVEVLAGA
ALLQALLETG DYAQIIDIGP AIFAQTVEFG QARYIGAIVG SPLCRALLAV GRVSEAVETC
ERMAALDPLP LGLVHVFECQ AEIALVLGDS DRVAAAASAS RALPPGPQVA GRMTANLLRF
DLESTALAGD MDQSAILIRS ASTQLEKQGG VSWPLLASAM RVAIDTNRKD VAQQLADLAA
RTPCRNVVEQ AERLTVSAEM SRATVSDLDA WEAAAQSWAD LSQPFRQAYA LMQAGSAAVN
AGKRARGADH FGRAADLAHS IGARLLANQI ETLAAKARID LRGGKEGSTP KAKLGLTDRE
FEVLRLVAAG QSNREIADNL FISSKTASVH VSNILSKLAV PSRGAAAAMA HRLRIVDPA
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