Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4840 |
Symbol | |
ID | 6977934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 482901 |
End bp | 483569 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643394001 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002278819 |
Protein GI | 209546901 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.898949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00597159 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGATGACGC TCGACTTCTC GATCCTGCTG CGCTTCGAGC ACGCGCTGCT GCTCGGCCTG TGGATGACCA TCAAACTGAC GGTCATCTGC ATCGTGCTCG GATGCTCTCT CGGCTTCCTC GTCGGACTTG CCCGGGCATC CGGCAATCTG GCGCTTCGCG CGGTCTCCGG CGCTTATATC GAATTCTTCC GCGGTACGCC GGTCCTGATC CAGCTTTTCT GGATATTCTT CTGCCTGCCG CTCATCCTCG GCGTCGAGCT TTCGAACCTG GCGTCCGGCG TCATCGCGCT GACACTCTAT ATGGGCGCGA TCACCAGCGA GACCTTCCGC GCCAGCCTCA AATCCATCGG CCTCGAACAG TTGGATGCCT GCGTCGCGCT CGGCCTGCCG CGCAGCGCCC AGGTCATCAA CGTCGTGCTG CCGCAGGCGG TGCTGCGGGC CATCCCGACG CTGCTGTCGA ACTGTGTCAG CCTGTTCAAG GAGAGCGCGC TCGTTTCCGC CGTCGGCATG GCCGACCTGA TGTTCGTCGG CCAGAACATC TCGAACAATA CGGCGCGCCC CGTCGAAGTG CTGACGGTCG TCGCGCTGAT CTACTTCGCC ATCGCCTTCC CGCTGACGCG GGCGGTCTCC CTCATCGAGG GACGCATCCT TAAGAAGCTC GCAATCTGA
|
Protein sequence | MMTLDFSILL RFEHALLLGL WMTIKLTVIC IVLGCSLGFL VGLARASGNL ALRAVSGAYI EFFRGTPVLI QLFWIFFCLP LILGVELSNL ASGVIALTLY MGAITSETFR ASLKSIGLEQ LDACVALGLP RSAQVINVVL PQAVLRAIPT LLSNCVSLFK ESALVSAVGM ADLMFVGQNI SNNTARPVEV LTVVALIYFA IAFPLTRAVS LIEGRILKKL AI
|
| |