| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6006 |
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| Symbol | |
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| ID | 6977392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011366 |
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| Strand | + |
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| Start bp | 431801 |
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| End bp | 433882 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643393458 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_002278276 |
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| Protein GI | 209546386 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.155172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTGT GGCGCAAGAT CGCGATCGGG TCCGCCGCCG GCATCCTTCT TGCCGGCGCG
GCCCTTTTCG CGCTCGACGC CGCCGACAAG GCCTTTCCGC CACCACTCGA TAAAGCGGAT
CTGGTCTCCG CCGAGGTGCT CGATGCCGAC GGCCAATTGC TCCGCGCCTT CGCGACCTCG
GAAGGCCGCT GGCGGCTGAA GACCACGGTT GCCGACGTCG ATCCGCAATT CCTGCGCATG
CTGATCGCCT ATGAAGACCA GCGTTTCTAC GATCACGGCG GCGTCGACGC CTGGGCGCTC
GGGCGCGCGA GCCTGCAATT CATCCGCAAC GGCCGCATCG TTTCCGGCGC CTCGACGCTG
TCGATGCAGG TGGCGCGGCT GATCGAGCCG CGCGCCGGAC GTTCGCTTTC GGCAAAACTG
CTGCAGCTGG CGCGTGCCGT GCAGATCGAG CGGCGGCTGT CGAAGGAGCA GATCCTCGAC
CTCTATCTCA CCCATGCGCC CTATGGCGGC AATCTCGAAG GCGTGCGCGC CGCAAGCCTT
GCCTATTTCG GCAAGGAGCC GCGGCGCCTG ACGGTCGCCG AGGCCGCCCT GCTCGTCGCT
CTGCCGCAAT TGCCGGAACG GCGCCGGCCG GACCGCAATC TCCAGGCGGC GCAGGAGGCG
CGCAAGCGCG TGCTGGAGCG CGTCGCCGTG GCGGAGGCCG TCGGCGACGG CGAGGCAGCG
CGGGCTGAGG TTGTCGCCAT CCCGCCGCGG CGCATGCAAT TGCCGGCACT GGCCGCCCAT
GTCGGCGAAG CGGCTCTGCG CAAGGAGCCT TCGGTCCTCA AGCACCAGAC GACCTTGAAG
AAGCAGGTGC AGCAGGGGTT GGAGGCGGTC GCCCGGGCGG CGGCGATGAA ACTCGGGCCG
AAGCTTTCGC TCGCCATGGT GATGGCGGAT GCGCAGACCG GCGCGATCGT CGGCGAGGTC
GGCTCGGCCG ATTATTTCGA CGCCAGCCGC TCCGGCTGGA TCGACATGAC GCGCGTCAAC
CGCTCGCCCG GCTCGACGCT GAAGCCCTTC ATTTACGGGC TCGCCTTCGA GCAAGGCCTC
GTCTCCCAGG AGACGATCAT CGAGGATCGG CCGGCCGATT TCTTCGGCTA CCGGCCGCGC
AATTTCGACA TGAGCTATCA GGGCGACGTT ACCGTCCGCG AGGCCTTGCA GCTCTCCTTG
AATGTGCCAG CCGTCAAACT GCTCGACGCC GTCGGGCCGT CGCGGCTGCT GGTGCGCTTC
CGCCGCGCCG AGGTGCGTCC GGCTTTGCCG CCGAACGAGA CGCCGGGGCT GGCGATTGGT
CTTGGCGGCG TTGGGCTCAC GCTCAAGGAT CTGGTGCAGC TCTATACGGC GCTCGCCAAT
CGCGGCCAGC CGGCAAGGCT CGGCGACGGC ATCACCGGAA CGCCTGATAA GCTTGACGGC
GAACCGCTTT TGGAGCCGGT CGCGGTCTGG AATATCGCCG ATATTCTTTC CGGCATCATT
CCCCCTGCCG GCGCGCCGCA GCGCGGCATC GCCTACAAGA CTGGCACCAG CTACGGCTAT
CGCGACGCCT GGTCGGTCGG CTATGACGGG CGTTATGTGC TCGGCGTCTG GGTCGGACGG
CCGGATAACA GCGCCGTGCC GGGTTTGACC GGCTATGGCA CCGCCGCCCC CATCCTGTTT
GAAGGTTTCG CCAAATCAGG CATCGCGACG ACGCCGTTGC CCCGCCCGCC GGCCGGCGCC
GTGCGCATCG CCCAGTCCGA GCTGCCGATC AGCCAGCGGC GGTTTGCGCT GAATGCCAGC
GGCCTGCTCG TCGCCTCCGG CCGCGAGCCC GCGCCCCAGA TCGTCTATCC GCCCGAGGGC
GCCCATGTCG ATCTCGGCGC CGGCGCAGGC GACCTGTCGC CGCTGATGCT GAAGCTGCAG
GGCGGCCGCG CTCCCTTCCG CTGGCTTGCC AACGGCAAGC CGCTGCCCGA TCTCTCGCGC
CGGCGCACGC AGCAGTGGCT TCCGGATGGC GGCGGCTACT CGAAACTGAC CGTTATCGAC
TCGGCCGGAC GCGCCGCAAG TGTGGGCGTT TTCATCGACT AG
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| Protein sequence | MRLWRKIAIG SAAGILLAGA ALFALDAADK AFPPPLDKAD LVSAEVLDAD GQLLRAFATS
EGRWRLKTTV ADVDPQFLRM LIAYEDQRFY DHGGVDAWAL GRASLQFIRN GRIVSGASTL
SMQVARLIEP RAGRSLSAKL LQLARAVQIE RRLSKEQILD LYLTHAPYGG NLEGVRAASL
AYFGKEPRRL TVAEAALLVA LPQLPERRRP DRNLQAAQEA RKRVLERVAV AEAVGDGEAA
RAEVVAIPPR RMQLPALAAH VGEAALRKEP SVLKHQTTLK KQVQQGLEAV ARAAAMKLGP
KLSLAMVMAD AQTGAIVGEV GSADYFDASR SGWIDMTRVN RSPGSTLKPF IYGLAFEQGL
VSQETIIEDR PADFFGYRPR NFDMSYQGDV TVREALQLSL NVPAVKLLDA VGPSRLLVRF
RRAEVRPALP PNETPGLAIG LGGVGLTLKD LVQLYTALAN RGQPARLGDG ITGTPDKLDG
EPLLEPVAVW NIADILSGII PPAGAPQRGI AYKTGTSYGY RDAWSVGYDG RYVLGVWVGR
PDNSAVPGLT GYGTAAPILF EGFAKSGIAT TPLPRPPAGA VRIAQSELPI SQRRFALNAS
GLLVASGREP APQIVYPPEG AHVDLGAGAG DLSPLMLKLQ GGRAPFRWLA NGKPLPDLSR
RRTQQWLPDG GGYSKLTVID SAGRAASVGV FID
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