Gene Rleg2_5942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5942 
Symbol 
ID6977329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp357720 
End bp358331 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID643393395 
Productprotocatechuate 3,4-dioxygenase, alpha subunit 
Protein accessionYP_002278213 
Protein GI209546323 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0370017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGC TCGGCTACCT CAAGGAAACC CCGTCGCAGA CGGCCGGCCC CTATGTCCAT 
ATCGGCCTGA CGCCGAATTT CTGCGACATC ACGGGCGTCT ACGACAGCGA CCTCGGCACG
GCGATGGTCA ACGAAAAGAC GCTCGGCGAA CGCGTCACCG TCACCGGCCG CATCCTCGAC
GGCGCCGGCG CCCTGGTGCG CGATGCCGTC GTCGAGATCT GGCAGGCCGA CAGCGCCGGC
CTCTACAACA GCCCCTCGGA AATGCGCGGC GCCGCCGACC CGAATTTTAC CGGCTGGGGC
CGCTGCCCGA CGCGCAGCGA AGACGGCGTC TACAGCTTCG AAACCATCAA GCCCGGCCGC
GTCCCCTTCA AGGACGGCCG CAGACAAGCC CCGCACATCA CCTTCTGGAT CGTCGCCCGC
GGCATCAATA TCGGCCTGCA CACGCGCATG TACTTTCCTG AGGAGACCGA GGCCAACGCC
GCCGACCCGC TGCTTCTGCG CATTGAACAT CGCGAGCGCG TCGCAACCTT GATCGCCACC
CGCGACGGCG CCACCTGCCA TTTCGACATC CATCTGCAGG GTGCCAAGGA GACGGTGTTT
CTGGATATTT GA
 
Protein sequence
MQQLGYLKET PSQTAGPYVH IGLTPNFCDI TGVYDSDLGT AMVNEKTLGE RVTVTGRILD 
GAGALVRDAV VEIWQADSAG LYNSPSEMRG AADPNFTGWG RCPTRSEDGV YSFETIKPGR
VPFKDGRRQA PHITFWIVAR GINIGLHTRM YFPEETEANA ADPLLLRIEH RERVATLIAT
RDGATCHFDI HLQGAKETVF LDI