Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5942 |
Symbol | |
ID | 6977329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011366 |
Strand | + |
Start bp | 357720 |
End bp | 358331 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643393395 |
Product | protocatechuate 3,4-dioxygenase, alpha subunit |
Protein accession | YP_002278213 |
Protein GI | 209546323 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0370017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGC TCGGCTACCT CAAGGAAACC CCGTCGCAGA CGGCCGGCCC CTATGTCCAT ATCGGCCTGA CGCCGAATTT CTGCGACATC ACGGGCGTCT ACGACAGCGA CCTCGGCACG GCGATGGTCA ACGAAAAGAC GCTCGGCGAA CGCGTCACCG TCACCGGCCG CATCCTCGAC GGCGCCGGCG CCCTGGTGCG CGATGCCGTC GTCGAGATCT GGCAGGCCGA CAGCGCCGGC CTCTACAACA GCCCCTCGGA AATGCGCGGC GCCGCCGACC CGAATTTTAC CGGCTGGGGC CGCTGCCCGA CGCGCAGCGA AGACGGCGTC TACAGCTTCG AAACCATCAA GCCCGGCCGC GTCCCCTTCA AGGACGGCCG CAGACAAGCC CCGCACATCA CCTTCTGGAT CGTCGCCCGC GGCATCAATA TCGGCCTGCA CACGCGCATG TACTTTCCTG AGGAGACCGA GGCCAACGCC GCCGACCCGC TGCTTCTGCG CATTGAACAT CGCGAGCGCG TCGCAACCTT GATCGCCACC CGCGACGGCG CCACCTGCCA TTTCGACATC CATCTGCAGG GTGCCAAGGA GACGGTGTTT CTGGATATTT GA
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Protein sequence | MQQLGYLKET PSQTAGPYVH IGLTPNFCDI TGVYDSDLGT AMVNEKTLGE RVTVTGRILD GAGALVRDAV VEIWQADSAG LYNSPSEMRG AADPNFTGWG RCPTRSEDGV YSFETIKPGR VPFKDGRRQA PHITFWIVAR GINIGLHTRM YFPEETEANA ADPLLLRIEH RERVATLIAT RDGATCHFDI HLQGAKETVF LDI
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