| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5940 |
|---|
| Symbol | |
|---|
| ID | 6977327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | + |
|---|
| Start bp | 356554 |
|---|
| End bp | 356958 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643393393 |
|---|
| Product | 4-carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_002278211 |
|---|
| Protein GI | 209546321 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.1646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGA CCGCCTCCTC CTCGGAGCGC TACCGGCAGG GCATGGCGAC CCGCCGCGCC
GTGCTCGGCG ACGCCCATGT CGACCGCGCC GCAGCCGCTG CGACCGAGTT CGACCAGCCC
TTCCAGGAGC TGATCACCGA AGCCGCCTGG GGCCATGTCT GGTCACGCCC GGCGCTGAGC
AAGCGCGAGC GCTCGATCGT CACCATCGCC CTGCTCGCCG CTCTCGGGCA GGACGACGAG
GTCGCCATGC ATGTGCGCGC CACCGCCAAC ACGGGTGCCA CCCGCGAGGA TGTCTGCGAG
GCGCTCCTGC ATGTGGCGAT CTATGCCGGC GTTCCCGCCG CCAACCATGC GATCAAGATC
GCCAAACAGA CCTTTGCACA AATGGACGCC GAAAAGGCGG TCTGA
|
|---|
| Protein sequence | MNETASSSER YRQGMATRRA VLGDAHVDRA AAAATEFDQP FQELITEAAW GHVWSRPALS
KRERSIVTIA LLAALGQDDE VAMHVRATAN TGATREDVCE ALLHVAIYAG VPAANHAIKI
AKQTFAQMDA EKAV
|
|---|
| |