| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5923 |
|---|
| Symbol | |
|---|
| ID | 6977310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | + |
|---|
| Start bp | 340999 |
|---|
| End bp | 341754 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643393376 |
|---|
| Product | transcriptional regulator, histidine utilization repressor, GntR family |
|---|
| Protein accession | YP_002278194 |
|---|
| Protein GI | 209546304 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.113874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTT CCGGCGAGAT GAAGCGCGAA CTGGCGGAAA ATGATAGCAC GCCGCTTTAT
GCCGGCGTCA AGCAGGTGAT CCTCGACCGC ATCCACAGCG GCGAATGGCC GCCGAAATAC
CGCGTGCCGT CGGAAAACGA GCTGGTCGTC GAGCTCGGCG TCAGCAAGAT GACCGCCAAC
CGGGCGCTGC GCGAACTGGC CAATGAAGGC GAACTCGTCC GCATCCAGGG CGTCGGCTCC
TTCGTCGCCG AGCGCAAGGG CTATTCGGCG CTGTTCGAGG TGCGCAACAT CGCCGAGGAA
ATCGCCGAAC GCGGCCATGT TCATGAGGCT TCCGTCGTCG TCCTCGCCCA GGAAACCGCC
TCTCCGGAGA TCGCCGACGC GCTCGAACTT GCGATCGGCG CGGCGGTCTT CCACTCGCTG
ATCGTGCACA GCGAAAACGG CGTTCCGGTG CAGATCGAAG ACCGTTTCGT CCATCCGGAG
GCCGCTCCCG AATATCTCGA GCAGGATTTC ACCACCTTGA CGCCGAACGC CTATCTGACG
GCGGCCGCCC CGCTCAGCGG CTCCGAGCAC GTCGTCGAGG CGGCGATGCC GCAGGCCTGG
GAATGCAAGC TGCTGACTAT CCTGAAGACC GAACCCTGCC TGACGATCCG CCGGCGCACA
TGGTCGGCAA AACAGGTGGT CTCGACCGCC CGCCTCGTCT ATCCCGGCTA TCGCTACCGA
CTCGAAGCGC GCAGCGGCAA GATGTTCGAG GAATGA
|
|---|
| Protein sequence | MKRSGEMKRE LAENDSTPLY AGVKQVILDR IHSGEWPPKY RVPSENELVV ELGVSKMTAN
RALRELANEG ELVRIQGVGS FVAERKGYSA LFEVRNIAEE IAERGHVHEA SVVVLAQETA
SPEIADALEL AIGAAVFHSL IVHSENGVPV QIEDRFVHPE AAPEYLEQDF TTLTPNAYLT
AAAPLSGSEH VVEAAMPQAW ECKLLTILKT EPCLTIRRRT WSAKQVVSTA RLVYPGYRYR
LEARSGKMFE E
|
|---|
| |