Gene Rleg2_5621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5621 
Symbol 
ID6977012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp7839 
End bp9737 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content64% 
IMG OID643393078 
Producttype II secretion system protein E 
Protein accessionYP_002277896 
Protein GI209546006 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGA AGATTTCCTA TGAGGACGGC AGCGGCCGGG AGGTGATCCC GCTCTCGGCA 
AACGAGACCT ATTTCGTCGG CGAAAGCAGC ACGCTGACGC TGCCGGCCGG CGCCGGCGTG
GTGCGGCTGC GCGGCAGCCA CGTCTCCTCG CCGCAATTCG TGCTGCGCAA ATCCGGCCAG
GGCTGGTCGG TGCAGCATCA CGGCCGCAAC CCGACCCGCG TCGACGATCA GCCGCTTCGA
GCCGGCACGC CGGTTGCGGT TTCCGCCGGC ATGTCGATCT GGGTGCCGAA CGTCACGATC
GAACTCGTCG AACCGGCCGC GGCCGCCGAA GCGGTGACGC AGTTTCCCGA TCAGGAACGC
GTACTCGCCT TGCAGATGGA GATCCACGAG CGACTGCTGA AGGACACGCA ATACGACCGG
CTGGTGAAAT CCTCTGATTT CGGCCGGGAG GATACGCGAA ACCGCATCCG CGAACGGCTC
GACATGTTCA TCAAGGAAGC GCTCGACGGC GCGCCGCAGG ATCTCGTCAT CCTCGTCATC
AAGAACGCCG TCTATCGGTG GCTGGCAAAA CGCATCGCCC GCACCGGGCG GCGCGACGCC
TCGTCAACTG CCGCCAGCTT GTCGCGCGAG GAGCAGGACA ATCGCCGGCT GTTCGACGTC
GGCAAGGCGC TGATCTCGGC GCTGCAGCTG AAGCTGAATT TCGAATCCAC CCGCGCCGAC
TTCGCCCAGC TCGACACCCG CTTCAGCGCC GCCTTCCAGT CCCGCCAGGC GCTGTTCAAT
GCCGGCGACC GCTACGAGAT CGCCCATATG CATCTACGTT CGAATATCGA AGAGCTGATG
TACCGCTGGG GCACGATCTC GGAACTGATG GATCTCGATG TCATCTCGGA AATCATGGTG
ACGCGTTATG ACGAGATCTA TGTCGAAAAA TTCGGCCTGC TGGAACGTTA TCCCTTTGCC
TTCGCTAATG AGCGGCAGCT GATGAAGGTG ATCGAGCGCA TCGCCGTCGA TTCCAACCGC
TCGATCAACG AGAGCGAGGC GATGGCCGAC TTCCGCATGC CGGATGGATC GCGCGTCAAC
GCCGTCATTC CGCCGCTGGC GGTCAAGGGC GCTTGCCTCA CCATCCGCAA GTTCGGCGGC
AAGTCGCGGC TCGACATCTC CAAGCTGGTC ACGGCCGGCG CACTCAGCGA GCCGATGCGC
GCCTTCCTCG AGGCGGCGGT CCGCGCCCGC AAGAACATCG TCGTCTCCGG CGGCACCGGC
TCCGGCAAGA CGACGCTCTT GAACAGCCTG TCGCAGTTCA TCCCGATCGG CGAGCGCGTC
GTTGCCGTCG AGGACACGTC GGAACTGCAG CTCGACGGCA TTCATGTCGT CTATCTGCAA
TCGCGGCCGA AGACGGCGGA GTCCGAAACC AGCGTCACCA TCCGCGATCT CGTGCGCAAC
GCGCTGCGCA TGCGCCCCGA CCGCATCATC GTCGGCGAGT GCCGCGGTGC CGAGGCGATC
GATATGCTGC AGGCGATGAA CACCGGCCAT GCCGGCTCGA TGACGACGGC GCATGCCAAT
ACGCCGCAGG ACATGATGAC CCGCCTGGAG GTGATGGTGC TGCAGGGGCA GAGCTCGCTG
CCGGTCATGG CGATCCGCCA GCAGATCGTT GCCGCCGTCG AGCTCGTCGT GCAGCTGAAC
CGCCTGGAAA GCGGGCGGCG CGCGGTGACC GAAATATCCG AGGTGATCGG CATCGATCCG
GATACCGGCC TCGTCATCGT CGAGCCGATC TTCCATCTGG TCGGGCGCGC CGGCGGCCAG
GCGGTGCATG CCTTCACCGG CTATCTGCCG AGCTTCGTCG CCGAGCTCGT CGAGTTCGGC
GAAGACGGCG AAATCGAAAA ACTCGATATG TTCGTTTAG
 
Protein sequence
MLLKISYEDG SGREVIPLSA NETYFVGESS TLTLPAGAGV VRLRGSHVSS PQFVLRKSGQ 
GWSVQHHGRN PTRVDDQPLR AGTPVAVSAG MSIWVPNVTI ELVEPAAAAE AVTQFPDQER
VLALQMEIHE RLLKDTQYDR LVKSSDFGRE DTRNRIRERL DMFIKEALDG APQDLVILVI
KNAVYRWLAK RIARTGRRDA SSTAASLSRE EQDNRRLFDV GKALISALQL KLNFESTRAD
FAQLDTRFSA AFQSRQALFN AGDRYEIAHM HLRSNIEELM YRWGTISELM DLDVISEIMV
TRYDEIYVEK FGLLERYPFA FANERQLMKV IERIAVDSNR SINESEAMAD FRMPDGSRVN
AVIPPLAVKG ACLTIRKFGG KSRLDISKLV TAGALSEPMR AFLEAAVRAR KNIVVSGGTG
SGKTTLLNSL SQFIPIGERV VAVEDTSELQ LDGIHVVYLQ SRPKTAESET SVTIRDLVRN
ALRMRPDRII VGECRGAEAI DMLQAMNTGH AGSMTTAHAN TPQDMMTRLE VMVLQGQSSL
PVMAIRQQIV AAVELVVQLN RLESGRRAVT EISEVIGIDP DTGLVIVEPI FHLVGRAGGQ
AVHAFTGYLP SFVAELVEFG EDGEIEKLDM FV