Gene Gdia_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3548 
Symbol 
ID6977001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3883721 
End bp3884977 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content72% 
IMG OID643393068 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 
Protein accessionYP_002277886 
Protein GI209545657 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCCC CCCAGCCGGC CGCCCCTCAC CCCGCCGGGG GGCGCACGGT CCTGCTGATC 
GTCTGCGGGG GGATCGCGGC GTACAAGACC CTGGAACTGA TCCGGCTGCT GACGGCGGGC
GGCGTGCGCG TGCGCACCGT CCTGACCCGG GCGGGCGCGC AGTTCGTCAC CCCGCTCAGC
CTTCAGGCCC TGACCGGGGA ACGGGTGTTC AGCGACCTGT TCTCGCTGAC CGACGAGAGC
GAGATGGGGC ATATCGTCCT GTCCCGCTCG GGCGACCTGC TGGTGGTCTG CCCGGCGACG
GCGGACATCA TGGCCCGCAT GGTCACGGGC CAGGCCGACG ATTTGGCCAG CACCGTGCTG
CTGGCGACCG ACAAGCCGGT CATGATCGCG CCCGCGATGA ATGTCCGCAT GTGGGAACAT
CCCGCGACCC AGGCCAACCT GGCCACCCTG ACCGCGCGCG GCGTCGCGGT CGTCGGGCCC
GAAACCGGCC TGATGGCCTG CAACGAGACC GGGCCCGGCC GCCTGGCCGA ACCCGCGCGG
ATCGCCGAGG CGATCTTCGG CCACTTCGCG GCCGGCGTGC GAAGCCCGTC TCTGGCCGGG
CGGCACGCGC TTGTCACCGC CGGGCCGACG CACGAGCCGA TCGATCCGGT GCGGTACCTG
GCCAACCGGT CGTCGGGCCG GCAGGGTTAC GAAATCGCGG CGGCGCTGGC GGCGCACGGC
GCGCGCGTGA CGCTGGTCAG CGGCCCGGTG GATATTCCGC CCCCGCCCGG TGTCGAACTG
CGCGCCGTGG AAACCGCGAT CCAGATGCAG GATGCCTGCC AGGACGCGCT GCCCTGCGAC
ATCGCCGTCT GCACCGCCGC CGTGGCCGAC TGGCGCGTCG CCCAGACCTC CGGTCACAAG
ATGAAGAAGG CCCCCGGCGC GCCCCCGCCG GTCCTGACCC TGGTGCCCAA TCCCGATATC
CTGGCGCAGT TGTCGCTGCC CGGCCCCGCG CGGCCGGCCC TGGTGGTGGG ATTTGCCGCC
GAAACCGACG ATGTCGAGCA GCATGCCGGC ACCAAGCGGC TGGACAAGGG CTGCGACTGG
ATCGTCGCCA ACGACGTGCG GCCGGAAACC GGCATCATGG GCGGGACGGA AAACGAGATC
ACCCTCATCA CCGCCGATGG CGCCGAACGC TGGCCGCGCC AGGACAAGGA ATCCGTGGCC
CGGCACCTGG CCCGGCGGAT CGCCGCCTTC TTTTCCCCCG ACCGGAGTGT TCCATGA
 
Protein sequence
MAAPQPAAPH PAGGRTVLLI VCGGIAAYKT LELIRLLTAG GVRVRTVLTR AGAQFVTPLS 
LQALTGERVF SDLFSLTDES EMGHIVLSRS GDLLVVCPAT ADIMARMVTG QADDLASTVL
LATDKPVMIA PAMNVRMWEH PATQANLATL TARGVAVVGP ETGLMACNET GPGRLAEPAR
IAEAIFGHFA AGVRSPSLAG RHALVTAGPT HEPIDPVRYL ANRSSGRQGY EIAAALAAHG
ARVTLVSGPV DIPPPPGVEL RAVETAIQMQ DACQDALPCD IAVCTAAVAD WRVAQTSGHK
MKKAPGAPPP VLTLVPNPDI LAQLSLPGPA RPALVVGFAA ETDDVEQHAG TKRLDKGCDW
IVANDVRPET GIMGGTENEI TLITADGAER WPRQDKESVA RHLARRIAAF FSPDRSVP