| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3490 |
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| Symbol | |
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| ID | 6976942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3820643 |
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| End bp | 3822079 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643393010 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002277829 |
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| Protein GI | 209545600 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.057514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG GAAAGGGCTT CGGCCGGCTA GAGAACAAGC CTGTCGCCAC CAGGCCGGAT
CCGGCGCCGA GCCAATCGGC GGGGGGCCTT CAGCCTGTTC AGGAGCCGAG CCAGCCACCC
GCCGTCCCGG CGGTTCCGGA CCAGGCCCCC GTTGTCGATG TCGAGGAAAA CACGGCGACG
AAAGCCCATT CGCTGGAATT GCGCGCGCTG TGCCTGGCCC GTCTGGATCC GGGCGTCGTG
CTCGCCCTGG CGCCCGAGCG GCTGGCCGAG GAAGTCGAAC GCGTCGTTGG CCAGGCCGCA
TCCGAGCGGC GCATCCAGCT CAACCTGCGC GAGCAGCGGG AAATCGCGAC CGAACTTGTC
CATGACATGC TCGGTCTCGG GCCGATCCAG CCCCTGCTGG ACGACGAAAC GATTTCGGAC
ATCCTGATCA ACGGGCCGAA CCGGATCTTC GTGGAAAGGC GGGGCAAGAC GGTCCTGTCG
AATGTCCGGT TCCGCGATGT CGATCATCTG GTGTCCGTCA GCCAGCGGAT TGCCTCGGCT
GTCGGGCGGC GCGTCGACGA ATCCAGCCCG ACCGTCGATG CGCGCCTGAA GGATGGATCG
CGCGTCAATA TCGTCTTTCC GCCGCTGGCG CTGGACGGTC CCTATGTATC GATCCGGAAA
TTTTCCAAAC GCCCGATCAA TTTTTCCCGT CTGGTCGAAA ATGGTAGCTG CACGCCCAAG
CTGGCGAAGA TCCTGGAAAT CGCGGGACGG GTGCGCCTGA ATATCGTGAT TTCGGGCGGC
ACGGGGTCGG GCAAGACCAC CCTGATGAAT GCGGTGTCGC ATTTCATCGA TTTCGACGAA
CGCGTCATCA CGGTGGAAGA CGCGGCGGAA CTGCAGCTTC AGCAGCCGCA CGTCGTGCGT
CTGGAAACCC GTCCCCCGTC GATCGAGGGC AAGGGGGAAG TCACCCAGCG CGATCTTGTG
CGCAATGCGC TGCGTATGCG CCCCGACCGG ATCATCATCG GCGAGGTCCG AGGCGCCGAG
GCGTTCGACA TGCTGCAGGC CATGAATACC GGCCATGACG GCAGCATGTC GACGATTCAC
GCCAACACCA CCCGCGATGC CGTCACCCGT ATCGAGAACA TGGTCCAGAT GGGCAGCTTC
GGACTGCCGA CCACGGCCAT CCGGACCCAG ATCGTGGGGG CGGTGGACAT GATCGTGCAG
GTCGGCCGTC ATCGCGACGG CGGCCGCCGG ATCGTGCAGG TGACCGATGT CTCGGGGCTG
GAGGGCGATG TCGTCGTCCT GAACGATATC TTCAATTTCG TCTTCGACGG GGAAGACATG
GACGGACGCC TGCACGGGCG GTACGAGGAA TCGAAGATCC GCCCGAGCTT TTTCGACAAG
CTGAAATATT ATGAGCTGGA TCGTGCCTGG TACGCGGCGT TCGAAGAGCT TGAGTGA
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| Protein sequence | MSFGKGFGRL ENKPVATRPD PAPSQSAGGL QPVQEPSQPP AVPAVPDQAP VVDVEENTAT
KAHSLELRAL CLARLDPGVV LALAPERLAE EVERVVGQAA SERRIQLNLR EQREIATELV
HDMLGLGPIQ PLLDDETISD ILINGPNRIF VERRGKTVLS NVRFRDVDHL VSVSQRIASA
VGRRVDESSP TVDARLKDGS RVNIVFPPLA LDGPYVSIRK FSKRPINFSR LVENGSCTPK
LAKILEIAGR VRLNIVISGG TGSGKTTLMN AVSHFIDFDE RVITVEDAAE LQLQQPHVVR
LETRPPSIEG KGEVTQRDLV RNALRMRPDR IIIGEVRGAE AFDMLQAMNT GHDGSMSTIH
ANTTRDAVTR IENMVQMGSF GLPTTAIRTQ IVGAVDMIVQ VGRHRDGGRR IVQVTDVSGL
EGDVVVLNDI FNFVFDGEDM DGRLHGRYEE SKIRPSFFDK LKYYELDRAW YAAFEELE
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