Gene Gdia_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3443 
Symbol 
ID6976895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3771224 
End bp3772300 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID643392964 
Producttype III secretion exporter 
Protein accessionYP_002277783 
Protein GI209545554 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.942918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAG GATCGGGCGG TGGCGAGAAG AGCCAGGACC CTACCGGGAA AAGGCTGGAG 
ACCGCGCGGG AAGAGGGAAA CGTCGCCCAG TCGCGCGAAT TGCTGATGCT TGCGATACTT
GGCGGGTTTC TGCTGGTCTT TACCATGGCG ACCGCAGACT CGGCGCGCAG GTTCGTCGCC
CATGTGGGTG GCACCATGGA ACATTTCGAC AGCATCCCGA CGGACATGAC GTCGATTTAC
CGGATCGCGG TCCAGACGGC CCTGGAAGGG GTGCTGCTGG CGGCCCCGCT TGTGTTTACC
GGTTTCGTGG TGACCATCGC CTGCGGAATG CTCCAGACGG GGTTCCTGTA TCGTCCGCAG
GCCATTCTTC CGGATATCAC GCGTCTTTCG CCCATGCGCG GCCTCCAGCG CATGTTCGGC
ATGACCAACG TGGTGGAGAT GCTCAAGAGC CTGACGAAGT TCGTCGTGTT CGGGGTCGTT
CTCTACGCCG TGGCGAAGGG GACGCTGCAT GTGGCGCCCG AGGCCGAGCG GTGGTCCATG
CTCCGTCTCG TCTCGGAACT TTCCTCGTGG TTCGCGTATG CCGTGCTGGT CGTCCTGCTC
GTGCAGTGCG TCATAGCCAT CCTCGACGAC CTCTGGACGC GCTATCACCG GATCGTCGGG
CTGCGCATGA GTTTCCAGGA CATCAAGGAC GAGTTCCGCC AGACCGAGGG CGATCCGAAG
GTGAAGGGGC GGCTCAAGCA GATGCGCCGC CGGCGTGCCC GGCGGCGCAT GCTCCAGGCG
GTCAAGACCG CCACGGTCGT CATCACGAAC CCGACGCATT ACGCCGTGGC GCTGTCCTAC
GAAAGCGGGG CGGACAGTGC TCCGAAGATA GTGGCCAGCG GAACCGACGA ACTCGCGGCG
CGCATCCGCC ATGCCGCGGA GGATGCAAAG GTCCCCGTGG TCGCGAACCC ACCGCTGGCC
CGCGCGCTCC ATGCGCTTCC ACTGGATTCC GAAATCCCGT CGGAATATTT CCAGCCCGTC
GCGGCGATCA TCGCCTATGT CATGAAGCTC AAGACTCCCG GTGCGCGCGC TCCATAG
 
Protein sequence
MAEGSGGGEK SQDPTGKRLE TAREEGNVAQ SRELLMLAIL GGFLLVFTMA TADSARRFVA 
HVGGTMEHFD SIPTDMTSIY RIAVQTALEG VLLAAPLVFT GFVVTIACGM LQTGFLYRPQ
AILPDITRLS PMRGLQRMFG MTNVVEMLKS LTKFVVFGVV LYAVAKGTLH VAPEAERWSM
LRLVSELSSW FAYAVLVVLL VQCVIAILDD LWTRYHRIVG LRMSFQDIKD EFRQTEGDPK
VKGRLKQMRR RRARRRMLQA VKTATVVITN PTHYAVALSY ESGADSAPKI VASGTDELAA
RIRHAAEDAK VPVVANPPLA RALHALPLDS EIPSEYFQPV AAIIAYVMKL KTPGARAP