| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3373 |
|---|
| Symbol | gatB |
|---|
| ID | 6976818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3694895 |
|---|
| End bp | 3696343 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643392888 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_002277714 |
|---|
| Protein GI | 209545485 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.271177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATC TGGTCGAAGG CCGTACCGGC CCCTGGGAAC TGGTCGTGGG GCTGGAAGTC
CACGCCCAGG TCATCAGCCG GTCCAAGCTG TTCTCGGGCG CCTCGGCCTC GTACGGGGGC
GAGCCGAACA CCCATGTCAG CCTGGTCGAT GCCGGTTTCC CCGGCATGCT GCCGGTCATC
AACCGCGAAT GCGTGGCCCA GGCGGTGCGG ACCGGCCTGG GGCTGAAGGC GCGGATCAAC
CTGGAAAGCC GGTTCGACCG CAAGAACTAT TTCTATGCGG ACCTGCCGAC GGGCTACCAG
ATCAGCCAGT TCGCCCACCC GATCATCGGC GAGGGCGCGG TGGAAATCGA ACTGGCCGAC
GGCGCGACCC GCACCATCGG GATCACGCGC CTGCATCTGG AACAGGATGC CGGCAAGTCG
ATGCATGACC AGGACCCGAC GCGGTCCTTC ATCGACCTGA ACCGCGCGGG CGTCGCGCTG
ATGGAAATCG TCAGCGAACC CGATATCCGC ACGCCCGAGG AAGCCGGGGC CTATCTGCGC
AAGTTGCGCA TGATCCTGCG CTACCTGGGC ACCTGCGACG GCAACATGGA AGAGGGTTCG
ATGCGCGCCG ACGTGAACGT GTCGGTCCGC AAGGCGGGCG AGCCGTTCCG CACCCGGTGC
GAGATCAAGA ACGTCAATTC GATCCGCTAC GTGATGCAGG CGATCGAGGT CGAGGCCGTC
CGCCAGGTGG AAATCTGGGA AAGCGGCGGC GAGGTCGATC AGGAGACCCG CCTGTTCGAC
CCCGCCCGGG GCGAGACACG CTCGCTGCGC AGCAAGGAAG ACGCCCACGA CTACCGCTAT
TTCCCCGATC CCGACCTGCT GCCGCTGGTG ATCGAGGAAG CATGGGTCGA ATCGCTGGCC
GCCGTCCTGC CGGAACTGCC GGATGCCAAG CGCCAGCGCT TCCAGGACGA GTACGGCATC
CCGCGCTACG ATGCCGGGGT GCTGGTGGCC GAACAGGCGA CCGCCGATTT CTACGAAACT
GTCGCGCGCG GGCGGGACCC GCGCCTGGCG GCCAACTGGG TGATCGGCGA CCTGTTCGCG
GCACTGAACC GCACCGGCCG CACGATCCAG GACAGCCCGA TCAGCGCCGA CGCGCTGGGC
GGTATGCTGG ACCTGGTCAC GGACGGCACG ATCAACGGCA AGATTGCCAA GGAAGTGTTC
GAGGATATGC TGGAGACCGG CGACCCCGCC GCCGCGATCG TCGAGCGCAA GGGATTGCGG
CAGGTCACCG ATACCGGGGC GATCGACGCC GCCGTGCAGG CCGTACTGGC GGCGAACGCG
GACAAGCTGG CCGAATACCG TTCGGGCAAG GACAAGCTGT TCGGATTCTT CGTCGGTCAG
GTCATGAAGG CGATGGCCGG CAAGGGCAAT CCAGCCCTGG TGAACGAGGC CCTGAAGAAA
GTTCTGTAA
|
|---|
| Protein sequence | MTYLVEGRTG PWELVVGLEV HAQVISRSKL FSGASASYGG EPNTHVSLVD AGFPGMLPVI
NRECVAQAVR TGLGLKARIN LESRFDRKNY FYADLPTGYQ ISQFAHPIIG EGAVEIELAD
GATRTIGITR LHLEQDAGKS MHDQDPTRSF IDLNRAGVAL MEIVSEPDIR TPEEAGAYLR
KLRMILRYLG TCDGNMEEGS MRADVNVSVR KAGEPFRTRC EIKNVNSIRY VMQAIEVEAV
RQVEIWESGG EVDQETRLFD PARGETRSLR SKEDAHDYRY FPDPDLLPLV IEEAWVESLA
AVLPELPDAK RQRFQDEYGI PRYDAGVLVA EQATADFYET VARGRDPRLA ANWVIGDLFA
ALNRTGRTIQ DSPISADALG GMLDLVTDGT INGKIAKEVF EDMLETGDPA AAIVERKGLR
QVTDTGAIDA AVQAVLAANA DKLAEYRSGK DKLFGFFVGQ VMKAMAGKGN PALVNEALKK
VL
|
|---|
| |