Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3361 |
Symbol | |
ID | 6976804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3681271 |
End bp | 3682635 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643392874 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002277702 |
Protein GI | 209545473 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0780323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.195256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCATCGGG CCGGTCTGTT GCAGGAAGCG GCGGAGGCCT ACAGGCACGA ACTGGTCCAG ACGCCGGATG ATGCGCGTAC CCTGAGTAAC TATGGCGGGT TGCTCTGCAC CCTTGGTGAT TTCCAGGAGG CGCATGACGT CTTGATTCGT GCGCTCAATC TGAAGCTGAC GCTGGTCGAT GCCTGGTCCA ATTTCGGCAA CGCATTGCTG GCACTCCAGC GCTATGACGA CGCGATTGCC GCGTACAAGG AGTGCCTGAC CCGTTATCCC CAGCATGTCC TGGCCCTCAG CAATCTCGGG GTCGCGCTCG ACCGGCGTGG GGAGCATGCG CTGGCGCGGA ACTTCCATCG CGTGGCGGTC AGGCTGGACC CGGAAAACGC GGAAAGCCAC GCCAACTACG CCATCTGCCT CCTAGCCCTG GGCGAGTACC AGGAGGGGTT CGAGGAATAT GAATGGCGCT GGAAAACCCG GATGCTCGGT CATCACCGCA TGACCGCCCC GTTGTGGGAG GGTGGAGATT TCACCGGACG CACCCTGCTG ATTCATACGG AAGGTGGCTT CGGGGATATG CTTCAGTTTT CCCGCTTCAT TCCGTTTGCA GCGCAATTCG GCGGGCGCAC CCTCGTTCGG GTCCGGAAGG AATTACTGTC CCTGTTTCGA CTTTCGTTCC CGGACCAGAC ATTCATATCG ATCGACGACC CTGTTCCGCC TCACGATCTG CAATGTCCGG CAGCCAGTCT TCCGCGTGCG TTAGGCACGA CTCTGGAAAC CATTCCGTCG CCAGGGGGCT TTCTGAAGGC AGACCCGCAA AAGGTGGCGT TCTGGGCTGA AAAACTCGAG GACGATCTGG AAAAAAGGGG CTTGTCTTCA GCGCCCCTTC GCGTCGGCCT CGTCTGGGCG GGGGCGCCGC ATCGCGGCGT CCGCGAGGTC AACATCGCCG ACCAGCGCCG TTCCACCGAT CTGGCGACGC TGGCATCGCT CGCCTCCGTG CCCGATACCC TGTTCTACAG CTTGCAGATC GGGGAAAAAT CCGTTCAGGC CAAAACGCCC CCCGCCGGAA TGCAACTGAT TGACCATACG CCCTTGCTTC ATGATTTCAG CGACACGGCT GCCTTCGTCA GCAATCTGGA CCTGGTCATC GCGGTCGATA CGTCAACCGC ACATGTCGCC GCCGGACTGG GAAAGCCCGT CTGGATGCTG TCCCGCTACG ATCAGTGCTG GCGATGGCTT TCCGGCCGCT CGGACTCGCC GTGGTATGAC AGCCTGCGGA TCTACCAGCA AAGCCAGCCG CTTGACTGGT CGGCTCCCAT GCACCGTATC ACGGCTGATC TGGCGAAATT TGCCCGGGCA TGGGGCCGAA CGTGA
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Protein sequence | MHRAGLLQEA AEAYRHELVQ TPDDARTLSN YGGLLCTLGD FQEAHDVLIR ALNLKLTLVD AWSNFGNALL ALQRYDDAIA AYKECLTRYP QHVLALSNLG VALDRRGEHA LARNFHRVAV RLDPENAESH ANYAICLLAL GEYQEGFEEY EWRWKTRMLG HHRMTAPLWE GGDFTGRTLL IHTEGGFGDM LQFSRFIPFA AQFGGRTLVR VRKELLSLFR LSFPDQTFIS IDDPVPPHDL QCPAASLPRA LGTTLETIPS PGGFLKADPQ KVAFWAEKLE DDLEKRGLSS APLRVGLVWA GAPHRGVREV NIADQRRSTD LATLASLASV PDTLFYSLQI GEKSVQAKTP PAGMQLIDHT PLLHDFSDTA AFVSNLDLVI AVDTSTAHVA AGLGKPVWML SRYDQCWRWL SGRSDSPWYD SLRIYQQSQP LDWSAPMHRI TADLAKFARA WGRT
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