Gene Gdia_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3357 
Symbol 
ID6976800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3676589 
End bp3677635 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content70% 
IMG OID643392870 
ProductSuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_002277698 
Protein GI209545469 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID[TIGR03242] succinylglutamate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00503474 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.566037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCT GTGGATCCGG AGCCCGCCTC GGCCGGTCGC CCCGCACACG CGGGCGTCCG 
ACCTTTCTGG AGACGCTGCC GACGCCCCCC CAGCCCCTGC CCCGCTTCGC GGTCAACATC
GCCCCGCCCG ACCTGTCACC CTGGCTGATG GACCATGGCG GCATTCCCGG CATCATCCAC
CGCGAGGGAG CGCAACCCGG CCCGCATGTC GTCCTGACGT CGCTGATCCA CGGCAATGAA
TATGCGGGGG CGGTGGTGCT GGACCGGCTG CTGCGCGAGG ACATTCGCCC GGCACGCGGA
CGCCTGTCCC TGGTCTTCGC CAATCCGCAG GCCTTCGCGC GCTTCGACCC GGACAATCCC
GTCGCCTCGC GATTTGTCGA GGAGGACATG AACCGGCTGT GGTGCCGGCA GGTCCTGTCC
GGCCCGCGCC GTTCGGTGGA ACTGGACCGC GCCCGGGCGA TTCTGCCGGT GATCGAATCG
GCGGATATCC TGATGGACCT GCATTCGATG CTGTGGCCCG GGACGCCGCT GATCCTGGCC
GGGCGGATGG AAAGCGGGCG CAGACTGGCA GCCATGATCG GCGATCCCCG GCTGATCGTC
TCGGACCATG GGCATCAGTC TGGTCCGCGC CTGATCGACT TCGAACGGTT TTCGGCCCCG
GGCAGCCCGG CCGCCGCCTG CCTGCTGGAA GCGGGCGCGC ATTGGAACAA GGACACCGTC
GAGGCCACCG ACCACGCCGT CCGCGCGCTG CTGCGGCATT CCGGGTTGCT GCCGGCGGAT
GAGGCCGCCC CCCTGCCGCC ACCCCGGCAC ATGATGGTGA CGGATATCGT GACGGCGCAG
ACCCCGCGCT TCCGTTTCGT CCGTCCCTTC CGGGGCGGCG AGGTCATTCG CCGGCGCGGC
ACCCTGCTGG CGCAGGACGG CCCCGACGAG ATCCGAACCC CCTACCCCGA CTGCATGCTG
GTCATGCCCA ACCTGCGTCC GGGCCTGGGG CAGACCGCCG TCCGGCTGGC GACGGTCGTC
CCGGAATCTT TCCCCCCCAC ACCGTGA
 
Protein sequence
MMSCGSGARL GRSPRTRGRP TFLETLPTPP QPLPRFAVNI APPDLSPWLM DHGGIPGIIH 
REGAQPGPHV VLTSLIHGNE YAGAVVLDRL LREDIRPARG RLSLVFANPQ AFARFDPDNP
VASRFVEEDM NRLWCRQVLS GPRRSVELDR ARAILPVIES ADILMDLHSM LWPGTPLILA
GRMESGRRLA AMIGDPRLIV SDHGHQSGPR LIDFERFSAP GSPAAACLLE AGAHWNKDTV
EATDHAVRAL LRHSGLLPAD EAAPLPPPRH MMVTDIVTAQ TPRFRFVRPF RGGEVIRRRG
TLLAQDGPDE IRTPYPDCML VMPNLRPGLG QTAVRLATVV PESFPPTP