Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3228 |
Symbol | |
ID | 6976667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 3536563 |
End bp | 3537486 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643392739 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_002277571 |
Protein GI | 209545342 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.549004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.344924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACC TGAAAGAAAT CGCACTGATC GGAACGATTC TGGCCTGCGA CGCGCATATG GCGCATGCCC GGGAGCTGCG CACCGTAGGC GTCTCGGTCG GCTCGCTGGG CAATCCGTAT TTCCTGTCCC TTGTGAAGGG GGCGACCGAC GCCGCGCACA AGATCAATCC CAACGCGCAG GTCTCGGCGG TGTCGTCGGA TTATGACCTG GGTAAACAAT CGTCGCAGAT CGACAATTTC ATCGCCTCGG GCGTCGACCT CATCCTGCTG GCGGCCGCCG ACCCCCACGC GGTCAGCGCG GCGGTGGGAC GGGCGAAGGC GGCCGGGATC GCGGTGGTGG CCGTGGATGT GGAGGCCGAT GGCGCGGACG CCACGATCCA GACCGACAAC ACGCAGGCAG GCAGGGTATC GTGCGCGTTC CTGGCATCCG CCATCGGCGG CAAGGGACAT GTCATCATCC AGAACGGTCC GCAGACCTCG TCGGTGATCG AACGCGTCAA CGGCTGCAAG GAATCCCTGG CCAAATATCC GGACATCACG ATCCTGTCCG ACAACCAGAA CGGGAAGATC TCCCGCGATG GCGGAATGGA CGTCATGATG GGTTACTTGA CGCGCTACCC TGATTTTCAG GGCCTGTTTA CCGTATCCGA TCCCCAGGCC ATCGGCTCCG ACCTGGCAGC GCACCAGTTG AAGCGGACCG GTATCGTCAT CACCTCGGTG GACGGCTCGC CCGACGCCGT CACCGCGTTG AAGGCCGACA CGCTGATCGC AGCCACGGCC AGCCAAAGCC CGGCCGAACA GGGAACCTTG GGCGTCCAGA CGGGCTACGA CATCCTGAAC GGGAAGAAAC CCGCCCAGAA GGTCACCCTG CTAGCGCCGC AACTGGTCGA CCGCAGGAAC GTCGCCGCCT ACAGGGGGTG GTAA
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Protein sequence | MKYLKEIALI GTILACDAHM AHARELRTVG VSVGSLGNPY FLSLVKGATD AAHKINPNAQ VSAVSSDYDL GKQSSQIDNF IASGVDLILL AAADPHAVSA AVGRAKAAGI AVVAVDVEAD GADATIQTDN TQAGRVSCAF LASAIGGKGH VIIQNGPQTS SVIERVNGCK ESLAKYPDIT ILSDNQNGKI SRDGGMDVMM GYLTRYPDFQ GLFTVSDPQA IGSDLAAHQL KRTGIVITSV DGSPDAVTAL KADTLIAATA SQSPAEQGTL GVQTGYDILN GKKPAQKVTL LAPQLVDRRN VAAYRGW
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