Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3198 |
Symbol | |
ID | 6976638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3503081 |
End bp | 3504022 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643392711 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_002277543 |
Protein GI | 209545314 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.216895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACTG ATCCCGACCT GACGGTCGAC CGGCTGCGAC TGCGGCGTCG GCTGGTATTC TGGCGGATCG CCGCCGTTGC CTCGTTCGTG CTGGCCCTGG TCGGCGTGGG CGGTCATTCG CTGATGCGCA GCGGCGGTTT CGCGTCGCGC GATCATCTGG TGCGCGTGCG CGTGGCGGGC ATCATCGGAT CGGACAATCG CAAGCTGATC GACCTGGTCG ACAAGGCGGC GAAAACCGAT TCGGTACGCG GCATGATCCT GGCCGTGGAC AGCCCCGGCG GATCGGTCAG CGGGGGCGAG GCACTGCATG ACGCGGTGGC CCGTTTCGCG GCCCGCAAGC CGGTGGCGGT GACGATGGGG GGCCTGGCCG CTTCGGCGGG GTACATGATT TCGGTGCCGG CGCAGCGCGT GTTCGCGGTC CAGTCCACCC TGACGGGGTC GATCGGCGTG ATCATGGAAG CACCGGACGT GTCGGGCCTG CTGGACCGGG TAGGGGTCAA GGTCGATCAA CTGGTCTCCG GCCCGATGAA GGGCCAGCCT TCGGGAACGC AGCCCCTGTC GCCGGAAGGG CGGCAGATGC TGCAGGGGGT GGTGGCGGAC CTGTTCGACC AGTTCGTCAC CATGGTGGCC GACGGGCGGC ATATGCCGGT CGAACGGGTG CGGACCCTGG CCGACGGCCG GCCCTATACC GGCCGGCAGG CGCTGTCGCT GGGACTGATC GACCAGATCG GGGACGAGCG CGACGCCAAG GCGTGGCTGA CCAGTACCCG GCACCTGAGC GGGACGATTC CGGTCGTGGA CCTGAAAGTG ACGACCGGGC AGGGCTGGAT GCACCGGATC ACGCGCAGCA TGCTGGGCGT CGTTTTCGGT GACGAGTGGG CAGGAAGCGT GCTTTCGCAA GGCGTTGCGC TTGACGGGGC TGTTGCGATC TGGAAACCTT GA
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Protein sequence | MATDPDLTVD RLRLRRRLVF WRIAAVASFV LALVGVGGHS LMRSGGFASR DHLVRVRVAG IIGSDNRKLI DLVDKAAKTD SVRGMILAVD SPGGSVSGGE ALHDAVARFA ARKPVAVTMG GLAASAGYMI SVPAQRVFAV QSTLTGSIGV IMEAPDVSGL LDRVGVKVDQ LVSGPMKGQP SGTQPLSPEG RQMLQGVVAD LFDQFVTMVA DGRHMPVERV RTLADGRPYT GRQALSLGLI DQIGDERDAK AWLTSTRHLS GTIPVVDLKV TTGQGWMHRI TRSMLGVVFG DEWAGSVLSQ GVALDGAVAI WKP
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