| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3194 |
|---|
| Symbol | |
|---|
| ID | 6976634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 3499390 |
|---|
| End bp | 3500676 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643392707 |
|---|
| Product | Uracil-DNA glycosylase superfamily |
|---|
| Protein accession | YP_002277539 |
|---|
| Protein GI | 209545310 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.4407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACG CGCACGCCAG AGTGACGCTG GCCCATGAGG TCGATTTCGC GGGCTGGCGA
ACCGCGACGC GCCGCCTGGT CATGGCCGGC CAGCCCGCCG GGCGGATTGC GTGGCGAATC
GACGCACGCA TGGCCGACCC GATCGAGGAC CAGGGCGCCG AAGCACCGGA GGGCGACCCT
TTTCACGTAT CCCGCGCCCT GCTGGACCTT GCCGAGACCG TCATCCAGGC GCGCGATCCC
GACCGTTTCG CGCTGCTCTA CCGGCTGGTC CAGCGCAACG CGGCCGGCGA ACGCGACCTG
CCGACCCGCA CCGACGACAC CGACATCGCC CGCGCGCTGG TCCTGGCCCA GGCGGTGCGG
GACGATACCG CCCGCCTGCG CGCGCATCTG GAGCTGCCCG CCGAGGACGT GGCCATCGGG
CAGTGGACTT CGGAGTCCCA CGTCCTCGTC CCCAATGCGC GATTCCTGAC CGTTCAGCGT
TCGCTGCGCC CCTGGGCGGT CTCGACGCCG GACGAAACCC TTCTGTGGAC GGGCCGCAGC
CTGCATCTGC TGCCGCCGGG CACCGCCCCG TCCGCCCTGC CCACGGACAG GGAGTCCTGG
GAGGGGACGG GCCTGACGCT GCGCCCCGCC GATCTGCCGC GTCCGGCCCT GCGCCTGACC
GAGGGACTGG ATATCGCACG GATCGACAGC CTGCCGGCCC TGATCGCGGC GGCGCGCGAC
TGCCTGATCT GCGCGATGGC ACGCCAGACG ACGCAGACGG TCTTCAGCGA TGGGCGCCCG
GGGGCCGCGC TGATGCTGGT GGGCGAACAG CCGGGCGACC AGGAGGACCG CGTCGGCCGG
CCTTTCGTCG GGCCTGCCGG GCAATTGCTG GACCGCGCCC TGCACGAGGC CAGAATTACC
CGCGATGCCG TCTACGTCAC CAACGCGGTC AAGCATTTCC GCTTCCAGAG GCGCGGCACC
CGGCGCCTGC ATGAAAAGCC GACCGTGGAA AACGTTACGG CCTGCGCGCC CTGGCTGGCG
GCGGAACGGC GCATCGTGGC GCCGCGCGTG CTGGTGATGC TGGGCGCCAC CGCCGCCGGT
GCCGTCCTGG GCCGCAGCGT CACGATCGGG CGCGAGCGGT CGCGCCCGAT CCCACTGGCC
GACGGGTCGA CCGGGCTGGT CACCGTTCAT CCGTCCTTCC TGCTGCGCCA GCCGGACGAG
GATGCACGCA CCCGGGAATA TGCCCGCTTC GTGGCCGATC TGCGCCTGGC GCGGGACCTT
CTGCCGGCGG CTACGCTCCC GTCCTGA
|
|---|
| Protein sequence | MPHAHARVTL AHEVDFAGWR TATRRLVMAG QPAGRIAWRI DARMADPIED QGAEAPEGDP
FHVSRALLDL AETVIQARDP DRFALLYRLV QRNAAGERDL PTRTDDTDIA RALVLAQAVR
DDTARLRAHL ELPAEDVAIG QWTSESHVLV PNARFLTVQR SLRPWAVSTP DETLLWTGRS
LHLLPPGTAP SALPTDRESW EGTGLTLRPA DLPRPALRLT EGLDIARIDS LPALIAAARD
CLICAMARQT TQTVFSDGRP GAALMLVGEQ PGDQEDRVGR PFVGPAGQLL DRALHEARIT
RDAVYVTNAV KHFRFQRRGT RRLHEKPTVE NVTACAPWLA AERRIVAPRV LVMLGATAAG
AVLGRSVTIG RERSRPIPLA DGSTGLVTVH PSFLLRQPDE DARTREYARF VADLRLARDL
LPAATLPS
|
|---|
| |