Gene Gdia_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3040 
SymbolrplI 
ID6976474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3327061 
End bp3327627 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID643392548 
Product50S ribosomal protein L9 
Protein accessionYP_002277385 
Protein GI209545156 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0359] Ribosomal protein L9 
TIGRFAM ID[TIGR00158] ribosomal protein L9 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.186174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG TAGAACTGAT CCTGCTCCAG CGCGTCGAAA ACCTGGGGCA GATGGGCGAC 
GTCGTGAAGG TGAAGCCGGG CTATGCCCGT AACTTCCTGC TGCCGCAGGG CAAGGCGATC
CGTGCCAACG CCCTGAACCG CGAGCGCTTC GAGCGCGAGC GCGTGCAGCT CGAGGCGCTG
AACCTGAAGC GCCGCGAGGA GGCCGAGCGC CTGTCCGAGC GCATGCACGG CCTGTCCGTC
GTGCTGATCC GCCAGGCCGG CGACAGCGGC AGCCTGTACG GCTCGGTCAC GACCCGCGAC
ATCGCCGAGG CGGCGACGGC GGCCGGCCTG ACGGTCGCCC GCACGCAGGT GATCCTGGAA
AACCCGATCA AGCAACTGGG CCTGTACGAC GTCCGCGTCG CGCTGCATCC GGAAGTTTCG
ATCCCCGTCA CGGTGAACGT GGCCCGTTCG GAAGAAGAAG CCGAGCGCCA GGCCCGTGGC
GAAGAGATCG GCGTCGAGAA GGAGGAGCCC TCGGGCTTCG TCGAGGAAGC GCTCGAGGAA
ACGGTGGAAG CTCCGGCGGA AGCCTGA
 
Protein sequence
MSAVELILLQ RVENLGQMGD VVKVKPGYAR NFLLPQGKAI RANALNRERF ERERVQLEAL 
NLKRREEAER LSERMHGLSV VLIRQAGDSG SLYGSVTTRD IAEAATAAGL TVARTQVILE
NPIKQLGLYD VRVALHPEVS IPVTVNVARS EEEAERQARG EEIGVEKEEP SGFVEEALEE
TVEAPAEA