Gene Gdia_3038 details

Gene Information

• Locus tag: Gdia_3038
• Symbol: rpsF
• ID: 6976472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gluconacetobacter diazotrophicus PAl 5
• Kingdom: Bacteria
• Replicon accession: NC_011365
• Strand: +
• Start bp: 3326281
• End bp: 3326766
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643392546
• Product: 30S ribosomal protein S6
• Protein accession: YP_002277383
• Protein GI: 209545154
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.59116
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 40
• Fosmid unclonability p-value: 0.184677
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGTTAT ATGAGACCGT GTTCATCGCA CGTAACGATG TATCGCAGCA GCAGGTCGAG 
GCCGTCGCCG ACGGGATCGC CGCGCTGCTG GAAACCGATG GCGGCGCTGT GAAGAAGCGC 
GAATATTGGG GCCTGCGCAG CCTGGCCTAC CGCATCAAGA AGAACCGCAA GGGGCACTAC 
ATGCTCCTGG GTCTGGATGC GAAGCCGGAG ACGATCAAGG AAATCGAGCG CCAGCTCGGC 
CTGAACGAGG ACGTGATGCG CGTCCTGACC CTGCGCGTCG ACGAGATCGA CGAGGCGCCG 
TCCGTGATCC TGTCCCGCAA GGGCGACGAG CGCGAGCGCG GCTTCCGTGG TCCGAAGCCG 
GCCGGCCGCT TTGAAAGCGG ACGTGGCGGT GCCGGCGGTG CCCGTCGCGG CTACGACGAT 
CGCGAGGAGT TCCGGGCACG CAACGAGCGT GAAGACGGGC GCGACACCGA CGGCGAAGCG 
GAGTAA 

 

Protein sequence

MPLYETVFIA RNDVSQQQVE AVADGIAALL ETDGGAVKKR EYWGLRSLAY RIKKNRKGHY 
MLLGLDAKPE TIKEIERQLG LNEDVMRVLT LRVDEIDEAP SVILSRKGDE RERGFRGPKP 
AGRFESGRGG AGGARRGYDD REEFRARNER EDGRDTDGEA E