| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2972 |
|---|
| Symbol | rpsC |
|---|
| ID | 6976406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3255645 |
|---|
| End bp | 3256322 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643392480 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_002277317 |
|---|
| Protein GI | 209545088 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.845651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACATA AAGTCAATCC GATCGGGCTG CGGCTCGGCA TCAACCGCAC CTGGGACAGC
CGCTGGTATG CCGGCGCCGA CTATTCGCGC CTGCTGCACG ACGACCTGAA GCTGCGTGCG
CACCTGCGCC GCAAGCTGTC GGGTGCCGGC GTGTCCCGCG TGGTGATCGA ACGTCCGGCG
AAGAAGCCCC GCGTGACGAT CTACGCCGCC CGCCCGGGTG TCGTGATCGG CAAGAAGGGC
CAGGACATCG ACGTCCTGCG CAAGGATCTG ACCCGCATGG CGAAGACCGA CGTTGCGCTG
AACATCGTCG AGATCCGCAA GCCCGAGATC GACGCGACCC TGGTTGCCGA AAACATCGCC
CAGCAGCTGG AGCGCCGCGT GGCTTTCCGC CGTGCGATGA AGCGCGCCGT GCAGTCCGCG
ATGCGTCTGG GCGCCCAGGG CATCCGGATC AATTGCGGCG GCCGTCTGGG CGGCGCCGAG
ATCGCGCGCG TCGAATGGTA TCGCGAGGGT CGGGTGCCGC TGCACACGCT GCGTGCGGAC
ATCGATTACG GCGTGGCCAC GGCGAAGACC ACCTATGGCA CCTGCGGTGT GAAGGTCTGG
ATCTTCAAGG GCGAGATCCT TGCCCACGAC CCGCTGGCGC AGGATCGTCG CGCCGCCGAG
CAGGCCCCGC AGCGCTAA
|
|---|
| Protein sequence | MGHKVNPIGL RLGINRTWDS RWYAGADYSR LLHDDLKLRA HLRRKLSGAG VSRVVIERPA
KKPRVTIYAA RPGVVIGKKG QDIDVLRKDL TRMAKTDVAL NIVEIRKPEI DATLVAENIA
QQLERRVAFR RAMKRAVQSA MRLGAQGIRI NCGGRLGGAE IARVEWYREG RVPLHTLRAD
IDYGVATAKT TYGTCGVKVW IFKGEILAHD PLAQDRRAAE QAPQR
|
|---|
| |