Gene Gdia_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2958 
SymbolrplJ 
ID6976392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3239702 
End bp3240220 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID643392466 
Product50S ribosomal protein L10 
Protein accessionYP_002277303 
Protein GI209545074 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0648852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCGTA CGGAGAAGCG GGAGTTTGTT GCCTCCCTCG CGGCCGTGTT CGCCGAGACG 
TCCATGGTCG TCGTCACCCG CAATGACGGG CTGACGGTTG CCGATGCGAC GATCCTGCGG
CAGCGCGTGC GTGCGGCTGG AGCGACTTAC AAGGTCGCGA AGAACCGGCT GGCCAACCTC
GCCCTGGCAG GGACCCGATT CGAAGGCATT TCGCCGCTGC TGAAGGGGCC GACCGCATTG
TCGTGGTCGG CTGATCCTGT GGCCGTGGCC AAGGTGCTTG TCGAGTTCGC CAAGACCAAC
GAAAAGCTCG TTCTGCTCGG TGGAGCGCTC GGCACCCAGA CATTGAATGT CGATGGGGTC
AAGGCGCTGG CCGAACTTCC GTCCCTGGAT ACGCTCCGGG CGCAGCTGGT GGGGCTCATC
TCCACGCCGG CCACGCGCAT CGCGGGTGTG CTCCAGGCGC CGGCAGGACA GCTTGCGCGG
GTTTTCGGGG CCTACGCCAA AAAGGACGAG GCTGCCTGA
 
Protein sequence
MDRTEKREFV ASLAAVFAET SMVVVTRNDG LTVADATILR QRVRAAGATY KVAKNRLANL 
ALAGTRFEGI SPLLKGPTAL SWSADPVAVA KVLVEFAKTN EKLVLLGGAL GTQTLNVDGV
KALAELPSLD TLRAQLVGLI STPATRIAGV LQAPAGQLAR VFGAYAKKDE AA