Gene Gdia_2915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2915 
Symbol 
ID6976349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3192246 
End bp3193595 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content73% 
IMG OID643392424 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_002277261 
Protein GI209545032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0891602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCG TGCACGCCCT TGCCCCGCGC CCGCTGACCG TCCGTGCGGC CGCCGCCCCC 
CTTTCCGGTT CCGTCGCGGT GCCGGGCGAC AAGTCGATCA GCCATCGCGC GCTGATGTTC
GCGGCCCTGG CGCGCGGCGA AACCCGGATT TCCGGCCTGC TGGAAGGCGA GGACGTGCTG
CGCACCGCCG ACGCCATGCG GGCGCTGGGC GCCGTGGTCA CGCGCACCGG TCCCGGCGCA
TGGCACGTGA CGGGCCGGGG GCTGGGCACG TTGCAGGAAC CGGCCGACGT GCTGGACATG
GGCAATTCGG GCACCGCCGC GCGCCTGCTG TCCGGCATCC TGGCCAGCCA TGGCATTTTT
TCGGTGATGA CGGGGGACGC CAGCCTGCGC GGCCGGCCGA TGAAGCGGGT GACGGACCCG
CTGGCCGCCA CGGGGGCCAC CTTCCTGTCG CGGGCGGGCG GGCGCCTGCC GCTGGCCATC
AACGGTGTCG CCGATCCCGC GCCGCTGTCC TATCGCCTGC CGGTCGCCTC GGCGCAGGTG
AAATCCGCCG TGCTGCTGGC CGGGCTGAAC GCCGCCGGCA CCACCCGGGT CGAGGAACCG
GTGGCCACCC GCGACCATAC CGAAAACATG CTGCGCCATT TCGGCGCCGA GGTGACGGTG
GAGGCGCTGG GCGCCGGCGG CCGCACCATC ACCCTGGTCG GGCGGCCCGA CCTGGTGGCG
CGTGACGTGG TGGTGCCGGG CGACCCGTCT TCGGCCGCGT TCGTGCTGGT GGCGGCGCTG
CTGGTACCCG GGTCGTCCGT GACCGTGCGC GGCGTAGGGC TGAATCCGCT GCGCACCGGC
CTGTTCACCA CCCTGCGCGA GATGGGGGGC GACCTGCGCC TGTCGAACGA GCGCGTGGAG
GGCGGCGAGC CGGTGGGCGA CCTGACGGCC GTCGCGGGCC CGCTGCACGG CGTGGACGTT
CCCGCCGACC GCGCGCCGTC GATGATCGAC GAATACCCGG TGCTGGCCGT CGCCGCCGCC
CACGCCACGG GCCGGTCGCG CTTTCGCGGC CTGGAGGAAC TGCGGGTCAA GGAAAGCGAC
CGCCTGGCCG CGACGGTGGC GCTGCTGCAG CGCAACGGCG TGGAGGTGGA GGTCGTGGGC
GACGACATGA TCGTCACCGG CACCGGCGGG GCGATACCCG GCGGCGGAGT GGTCGAAACG
CGGATGGACC ACCGCCTGGC CATGAGCGCC ACCGTGCTGG GCCTGGCCGC CAGGACCCCG
GTCGGGGTGG ACGACACCGC GTTCATCGAC ACCAGCTTCC CGGGCTTCAT CGACCTGATG
AACGGGATCG GCGCGGCGCT GACGCCATGA
 
Protein sequence
MDTVHALAPR PLTVRAAAAP LSGSVAVPGD KSISHRALMF AALARGETRI SGLLEGEDVL 
RTADAMRALG AVVTRTGPGA WHVTGRGLGT LQEPADVLDM GNSGTAARLL SGILASHGIF
SVMTGDASLR GRPMKRVTDP LAATGATFLS RAGGRLPLAI NGVADPAPLS YRLPVASAQV
KSAVLLAGLN AAGTTRVEEP VATRDHTENM LRHFGAEVTV EALGAGGRTI TLVGRPDLVA
RDVVVPGDPS SAAFVLVAAL LVPGSSVTVR GVGLNPLRTG LFTTLREMGG DLRLSNERVE
GGEPVGDLTA VAGPLHGVDV PADRAPSMID EYPVLAVAAA HATGRSRFRG LEELRVKESD
RLAATVALLQ RNGVEVEVVG DDMIVTGTGG AIPGGGVVET RMDHRLAMSA TVLGLAARTP
VGVDDTAFID TSFPGFIDLM NGIGAALTP