| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2875 |
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| Symbol | |
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| ID | 6976307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3141607 |
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| End bp | 3147153 |
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| Gene Length | 5547 bp |
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| Protein Length | 1848 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643392383 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_002277221 |
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| Protein GI | 209544992 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.189813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGA TCTTTCGCCT GGTCCTGATC GCATCGCCAT TCACGGCCGT GACCTCCGTA
TCGTTCGCCC AGACCTTGCC GACGGACTAC CTGCTGGCCC TGACCGACGG GAGCGGGGCG
AATACGACTG CGTACAGCAC GACAGGTACT CTTCAGACCT ATACAGTCAG CTTTACCGCG
CAGACGACCG GCACGAATTA TATCCTTTTC GCCTTCCGCA ATGATCCGGA TTACTGGACT
TTCGGGGATG TCAGCCTGGC CGTCCAGGGC AGAACGACCA ATCTCCTCAC CGATCCGTAT
TTTCTCTCCG GCGGGACGGT CAGCGGCAGC ACGAACGGAA TCGAGGCGCC CGCCAGTTGG
GGCGTCGTCT ATCAGACCGG AACCCCGCCA AACACTGCCG GCACCTGGCA AGCCCCTTCC
AGTTCGGCCG GGGCGTCCAC ACCCTCGCTG GCAGCCGGAA CGGCGGGCAC CTGGTTTGAC
GGCGCGGTAG GCAGCTTCGA CGGCATCTAC CAGGGGATCA ACCTGGTCGC CGGCGATACC
TACACGATCT CATTCACGAC GTCTTCGGGT GTTGCATCGA CAGCAACCGA TGGCGGCGTC
CAACTCGGTG TCTATACCGG CCCGTGTACC TCCCTGACTT CAGGCGCAAA TTGCACGCCC
GCGGGCGGTT CCGGATTTAC GGCGGCCGCG ACGCCGGAGC AGACCATCAA CGCCGGTTCG
TCCGCAACGC CCATTACCAC CCTCCAGAAC GCATCCGGCC TGGCCTCCAG CCCCGCGACC
ATCCTGCCGA TCCTGGATGG CGGGACGCTG ACGCTCGATG GCACGAACAT CACGCCCTAT
AGCTTCTCCA TTACCGGCAA CAACGGCACG ATCGACCTCG CCGGTCAGAG CGCCACGATC
TCCAATCCCA TATCCGACCA GTCCAGTGGC GTTCCGGGCG GCCTGACCAT CGCGAACAGC
GGCACCGGCG GCACGCTCAT CCTGACCGGC GCCAACACCT ATACCGGCGC CACCACCATC
GACGCCGGCG CCGCACTCGA CCTCCAGGGC GGTTCCGTCG CCGGCGCCCT CGCCAATGCC
GGCAGCCTGA CCCTCGACGG CGGCAGCGTC GGCGGCACCC TCACCGACAG CGGCGCCCTC
GCCGTCACCG CCAGCGGCGG CACCGCCGCC TCGCTGGCCG GCACCGGGAC CGGCACCCTC
GCCGGCACCC TGACCCTGAG CAACGCCGCC GACAGCTTCG CCGGCACCCT CGGCGGCACC
GGCGGCCTGA CCATCGCCGG CGGCAGCGAG ACCCTGACCG GCGCCAACAC CTACACCGGC
GCCACCACCA TCGACGCCGG CGCCGGACTG AACCTTTCCG GCTCGGTCGC CGGCGCCCTC
GCCAATGCCG GCACCCTGAC CCTCGACGGC GGCACGGTCG GCGGCACCCT CACCGACGAC
GGCGCCCTCG CCGTCACCGC CAGCGGCGGC ACCGCCGCCT CGCTGGCCGG CACCGGGACC
GGCACCCTCG CCGGCACCCT GACCCTGAGC AACGCCGCCG ACAGCTTCGC CGGCACCCTC
GGCGGCACCG GCGGCCTGAC CATCGCCGGC GGCAGCGAGA CCCTGACCGG CGCCAACACC
TATACCGGCG CCACCACCAT CGACGCCGGC GCCGCACTCG ACCTCCAGGG CGGTTCCGTC
GCCGGTGCCC TCGCCAATGC CGGCACCCTG ACCCTCGACG GCGGCACGGT CGGCGGCACC
CTCACCGACA GCGGCGCCCT CGCCGTCACC GCCAGCGGCG GCACCGCCGC CTCGCTGGCC
GGCACCGGCA CCGGCACCCT CGCCGGCACC CTGACCCTGA GCAACGCCGC CGACAGCTTC
GCCGGCACCC TCGGCGGCTC CGGCGGCCTG ACCATCGCCG GCGGCAGCGA GACCCTGACC
GGCGCCAACA CCTACACCGG CGCCACCACC ATCGACGCCG GCGCCGGACT GAACCTTTCC
GGCTCGGTCG CCGGTGCCCT CGCCAATGCC GGCAGCCTGA CCCTCGACGG CGGCACGGTC
GGCGGCACCC TCACCGACAG CGGCGCCCTC GCCGTCACCG CCAGCGGCGG CACCGCCGCC
TCGCTGGCCG GCACCGGGAC CGGCACCCTC GCCGGCACCC TGACCCTGAG CAACGCCGCC
GACAGCTTCG CCGGCACCCT CGGCGGCTCC GGCGGCCTGA CCATCGCCGG TGGCAGCGAG
ACCCTGACCG GCGCCAACAC CTATACCGGC GCCACCACCA TCGACGCCGG CGCCGCACTC
GACCTCCAGG GCGGTTCCGT CGCCGGCGCC CTCGCCAATG CCGGCAGCCT GACCCTCGAC
GGCGGCAGCG TCGGCGGCAC CCTCACCGAC AGCGGCGCCC TCGCCGTCAC CGCCAGCGGC
GGCACCGCCG CCTCGCTGGC CGGCACCGGG ACCGGCACCC TCGCCGGCAC CCTGACCCTG
AGCAACGCCG CCGACAGCTT CGCCGGCACC CTCGGCGGCA CCGGCGGCCT GACCATCGCC
GGCGGCAGCG AGACCCTGAC CGGCGCCAAC ACCTACACCG GCGCCACCAC CATCGACGCC
GGCGCCGGAC TGAACCTTTC CGGCTCGGTC GCCGGTGCCC TCGCCAATGC CGGCAGCCTG
ACCCTCGACG GCGGCACGGT CGGCGGCACC CTCACCGACA GCGGCGCCCT CGCCGTCACC
GCCAGCGGCG GCACCGCCGC CTCGCTGGCC GGCGCCGGGA CCGGCACCCT CGCCGGCACC
CTGACCCTGA GCAACGCCGC CGACAGCTTC GCCGGCACCC TCGGCGGCAC CGGCGGCCTG
ACCATCGCCG GCGGCAGCGA GACCCTGACC GGCGCCAACA CCTATACCGG CGCCACCACC
ATCGACGCCG GCGCCGCACT CGACCTCCAG GGCGGTTCCG TCGCCGGCGC CCTCGCCAAT
GCCGGCACCC TGACCCTCGA CGGCGGCACG GTCGGCGGCA CCCTCACCGA CAGCGGCGCC
CTCGCCGTCA CCGCCAGCGG CGGCACCGCC GCCTCGCTGG CCGGCACCGG GACCGGCACC
CTCGCCGGCA CCCTGATCCT GAGCAATGCC GCCGACAGCT TCGCCGGCAC CCTCGGCGGC
TCCGGCGGCC TGACCATCGC CGGCGGCAGC GAGACCCTGA CCGGCGCCAA CACCTACACC
GGCGCCACCA CCATCGACGC CGGCGCCGGA CTGAACCTTT CCGGCTCGGT CGCCGGTGCC
CTCGCCAATG CCGGCAGCCT GACCCTCGAC GGCGGCACGG TCGGCGGCAC CCTCACCGAC
GACGGCGCCC TCGCCGTCAC CGCCAGCGGC GGCACCGCCG CCTCGCTGGC CGGCGCCGGG
ACCGGCACCC TCGCCGGCAC CCTGACCCTG AGCAATGCCG CCGACAGCTT CGCCGGCACC
CTCGGCGGCT CCGGCGGCCT GACCATCGCC GGCGGCAGCG AGACCCTGAC CGGCGCCAAC
ACCTATACTG GAGGCACCAC GATCCGCGCG GGTGCGCTGA CCGGCACGAC GACCAGCTTC
GGCAGCGGTG CCATCGTGGA TAACGGCATC TTCAACCTGG CGCAGAACAG CGACGGCGTA
CTGACCAATA CCGTCAGCGG CTCGGGCATC CTGACGAAAT CGGGTGCGGG CAACGTGACG
CTGGCCGGGG TCAACAGCTA TGCCGGCGGC ACGCTGCTGC GGTCGGGCAC GCTGACGCTG
ACCAACGCGT CGGCCCTGGG CACCGGCGCG CTGAACATGG CCGAGAACAC GACGCTGGTC
CTGGCTGGCA GCAACCTGGC CCTGGGCAAC GCCATCGTCC TGAACGGCGA CCCCACGGTC
CAGGTCGACA GCGGCACCGA CAGCCTGACC GGCACGCTTG TCGACGGTTC GACCGCCGGC
ATCCTGGTCA AGACGGGCGT GGGCACCCTG GTCCTGAACG GCAACAGCAC CTACAGCGGC
GGCACCGAAA TATCGGGCGG CACGCTGCAG GTCGATGGCA GCCTGGCCAG TTCCGTGGTG
GCCGATAGCG GCACCACCCT GTCGGGCAAT GGTTCGGTGG GCACGACGAC GATCAGGAGC
GGCGCCACCC TGTCGCCGGC CGGCAGTGGA GCGGTCGGCA CGCTGACCGT CAACGGCAAC
CTGACGATGG CAGCGGGATC GAACTACATC GTCAGCGTGA ATACCGCCGG CGACCATGAT
TCCGTGCGGG TATCGGGTCA CGTATCGCTG GGCAGCGGTG CCATCACCGT CCTGGCGGCC
GATGGAACGT GGAACATTAC CCACCCTAAC ACCATCATGA CCGCGACCGG CGGGGTGTCC
GGCACGTTCG GCACCGTGGT GTCGAACTTC GCCTTCCTGA CGTCGAACAT CACCGCCGGA
GCGGACGGCA TCGTCGTCAA TCTGCAGCGC AACGAATTGA ATTTCGCGGA TGTCAGCACT
ACGCGTAACC AGACGGCCGT CGGCGTCGCA CTGCAGAACG TGACCTCGGG ACAATTGTAT
AACGAACTGG TGCAGACCGA TGCCGCCACA GCCCGCCATG CCCTGGGCGC GCTGTCGGGC
GAATTGCATG CCTCGGCGCG CACCGCGCTG ATCCAGGACA GCTTCTATGT GCGCGACGCG
GCGGTCGAGC GGCTGCGCGG CACGGAATGC GCGCCCGGCG CGGACAGCGG CATGAAGACC
GCCGCGTCCG ACGGCACACG CACCGACGGC ACCTGCCGGC CCGACCACGC ATCGCTGTGG
ATGCAGGGTT ACGGCACCTT CGGGCACAAC ACGGCCAACG GCAACGCCTC GGCCATGAGC
CATTCGGCAG GCGGCTTCGT GATGGGGGCG GATGCGCCGG TAGTGGGCTG GCATGTCGGC
GGGCTGGTCG GCTACGGCCA TAGCGCATTC GACAGCGGCG CCGCGGCATC GTACGGCCAT
GGCAACACGA TCAGCCTGGG CGGCTATGCC GGCACCCACT GGGGGCGCCT CGCCCTGCGA
ACGGGCGTTT CCTATAGCTG GAACATGCTG TCCATGACGC GCAACGTCGC CTTCACCGGA
TATTCGGACC GGCTGAACAG CGGCTATGAC GGCGGCACCG CCCAGGCATT CGGCGACCTG
GGCTACCGCA TGGACCTGGG GCCGCTGATG GTCGAGCCCT TTGCTGACGT GGCCTATGTC
AACCTGCACA CCGACCGCTT TACCGAACAT GGCGGCGCGG CAGCACTGAC CGGCCGTGCC
ATGGACACCG GCACGACCTA TGCGACCTTC GGGGCACGAC TGGCCGGCCG CCTGAAGGTC
GGCGGCGTCA CGCTGATACC GAACGCGACC CTGGGCTATC GCCACGCCTT CGGCCTGACG
ACCCCGACCA CGCGCGAATC CTTCGTGCAG AACGGCGGCG CATTCGACGT GGCCGGCGTA
CCGCTGTCCA CCGACGCCGC ATTGCTCAAG GCCGGATTGC AGGCCAGGCT GACCGACCGG
CTGGATGTCG GTCTCACCTA TATCGGCCAG TATGGCGACC AATCCACGGA CAGCGGCGTC
ACCGGCACCC TCAGCCTGAA GTTCTGA
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| Protein sequence | MAGIFRLVLI ASPFTAVTSV SFAQTLPTDY LLALTDGSGA NTTAYSTTGT LQTYTVSFTA
QTTGTNYILF AFRNDPDYWT FGDVSLAVQG RTTNLLTDPY FLSGGTVSGS TNGIEAPASW
GVVYQTGTPP NTAGTWQAPS SSAGASTPSL AAGTAGTWFD GAVGSFDGIY QGINLVAGDT
YTISFTTSSG VASTATDGGV QLGVYTGPCT SLTSGANCTP AGGSGFTAAA TPEQTINAGS
SATPITTLQN ASGLASSPAT ILPILDGGTL TLDGTNITPY SFSITGNNGT IDLAGQSATI
SNPISDQSSG VPGGLTIANS GTGGTLILTG ANTYTGATTI DAGAALDLQG GSVAGALANA
GSLTLDGGSV GGTLTDSGAL AVTASGGTAA SLAGTGTGTL AGTLTLSNAA DSFAGTLGGT
GGLTIAGGSE TLTGANTYTG ATTIDAGAGL NLSGSVAGAL ANAGTLTLDG GTVGGTLTDD
GALAVTASGG TAASLAGTGT GTLAGTLTLS NAADSFAGTL GGTGGLTIAG GSETLTGANT
YTGATTIDAG AALDLQGGSV AGALANAGTL TLDGGTVGGT LTDSGALAVT ASGGTAASLA
GTGTGTLAGT LTLSNAADSF AGTLGGSGGL TIAGGSETLT GANTYTGATT IDAGAGLNLS
GSVAGALANA GSLTLDGGTV GGTLTDSGAL AVTASGGTAA SLAGTGTGTL AGTLTLSNAA
DSFAGTLGGS GGLTIAGGSE TLTGANTYTG ATTIDAGAAL DLQGGSVAGA LANAGSLTLD
GGSVGGTLTD SGALAVTASG GTAASLAGTG TGTLAGTLTL SNAADSFAGT LGGTGGLTIA
GGSETLTGAN TYTGATTIDA GAGLNLSGSV AGALANAGSL TLDGGTVGGT LTDSGALAVT
ASGGTAASLA GAGTGTLAGT LTLSNAADSF AGTLGGTGGL TIAGGSETLT GANTYTGATT
IDAGAALDLQ GGSVAGALAN AGTLTLDGGT VGGTLTDSGA LAVTASGGTA ASLAGTGTGT
LAGTLILSNA ADSFAGTLGG SGGLTIAGGS ETLTGANTYT GATTIDAGAG LNLSGSVAGA
LANAGSLTLD GGTVGGTLTD DGALAVTASG GTAASLAGAG TGTLAGTLTL SNAADSFAGT
LGGSGGLTIA GGSETLTGAN TYTGGTTIRA GALTGTTTSF GSGAIVDNGI FNLAQNSDGV
LTNTVSGSGI LTKSGAGNVT LAGVNSYAGG TLLRSGTLTL TNASALGTGA LNMAENTTLV
LAGSNLALGN AIVLNGDPTV QVDSGTDSLT GTLVDGSTAG ILVKTGVGTL VLNGNSTYSG
GTEISGGTLQ VDGSLASSVV ADSGTTLSGN GSVGTTTIRS GATLSPAGSG AVGTLTVNGN
LTMAAGSNYI VSVNTAGDHD SVRVSGHVSL GSGAITVLAA DGTWNITHPN TIMTATGGVS
GTFGTVVSNF AFLTSNITAG ADGIVVNLQR NELNFADVST TRNQTAVGVA LQNVTSGQLY
NELVQTDAAT ARHALGALSG ELHASARTAL IQDSFYVRDA AVERLRGTEC APGADSGMKT
AASDGTRTDG TCRPDHASLW MQGYGTFGHN TANGNASAMS HSAGGFVMGA DAPVVGWHVG
GLVGYGHSAF DSGAAASYGH GNTISLGGYA GTHWGRLALR TGVSYSWNML SMTRNVAFTG
YSDRLNSGYD GGTAQAFGDL GYRMDLGPLM VEPFADVAYV NLHTDRFTEH GGAAALTGRA
MDTGTTYATF GARLAGRLKV GGVTLIPNAT LGYRHAFGLT TPTTRESFVQ NGGAFDVAGV
PLSTDAALLK AGLQARLTDR LDVGLTYIGQ YGDQSTDSGV TGTLSLKF
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