Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2612 |
Symbol | |
ID | 6976042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 2875884 |
End bp | 2876903 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643392128 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002276969 |
Protein GI | 209544740 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00297504 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACGCC TGGCCGGCGT GTCGCAATCC GCGGTGTCCC GTGCCTACAA GAAGGGCGGT TACGTCTCGC CCGAGATGCG CAGCCGGATC ATGGCGGCGG CGGCCGAACT GGAATATCGG CCCAGCCTGA TCCCCCGGAT CATGCTGACC GAACGGTCGA ACCTGGTCGC GGTCGTGGTG GGGGGACTGT ACAACCCGCT CTATGCCGGG ATCATCGACA CCTTGTCGGT CAGGCTGGAG GATGCGGGAT TGCAGACCCT GCTGGTGCAT GCCGAAAGCG GCCATATGCT GGACATCGCG CTGCCGCGCC TTGCCAGCTA CCGGGTCGAT GCGATCGTCA GCCCGCTGGC GGTCATGTCC GCCGCGACGG CCGAGGCGCT GGACCGGCTG GGGCTTCCCG TGGTGTCGTT CAATACCCCG GTGCGGGGCG GCCTGATCTC GACGATTTCG ACCGACGGGC TGGCGGCGGG GCGGGACATC GCGGCCCTGT TCGCGCGGCG TGGCGCCCGG CGCCCCGGCT TCGTCCAGGG GCCGAAGGGC AGTCCGGCGA GCGACGACCG GGAACGGGGA TACCGCAGGG CGCTGCGCGG GCTGGGGCTG GGCGCGCCGC GCACGGCACC GGGCGATTTC CGGTATGAGG GCGGGGTCGC GGCGGCGCAT GCCCTGCTGG GCGGGCGCAA TGCATGCGAT GCGATCTTCT GCGCGAACGA CCTGCTGGCG CTCGGGGTGA TGGATACCGC GCGGCGGCAT TTCGGGCTGC GCGTGCCCGA GGACCTGCTG GTGGCCGGCT TCGATAACAT CGATATGGCG TCATGGAGCA GCTACGGCCT GACCAGCTTC GTCCAGGATG TCGACCTCAT GGCCCGGCAC GCGGTGCAAC TGCTGACGCA GGCGCTGGAG ACCCCCGGAC GCACGGGGGA GCACGTCGTG ATTCCGGCAA CCCTGGTGGA GCGGGCCTCG ACGGGGAGTG ATGCAGGGGC CGACGGCGAG CGCGGCCGGG GTGTGCGCTG CGACGATTGA
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Protein sequence | MARLAGVSQS AVSRAYKKGG YVSPEMRSRI MAAAAELEYR PSLIPRIMLT ERSNLVAVVV GGLYNPLYAG IIDTLSVRLE DAGLQTLLVH AESGHMLDIA LPRLASYRVD AIVSPLAVMS AATAEALDRL GLPVVSFNTP VRGGLISTIS TDGLAAGRDI AALFARRGAR RPGFVQGPKG SPASDDRERG YRRALRGLGL GAPRTAPGDF RYEGGVAAAH ALLGGRNACD AIFCANDLLA LGVMDTARRH FGLRVPEDLL VAGFDNIDMA SWSSYGLTSF VQDVDLMARH AVQLLTQALE TPGRTGEHVV IPATLVERAS TGSDAGADGE RGRGVRCDD
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