| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2528 |
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| Symbol | |
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| ID | 6975958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2783355 |
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| End bp | 2784863 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643392046 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002276887 |
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| Protein GI | 209544658 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.310329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGC GGCCGGCCCC CCTGCTTCCC ACTGCGTCAC GTCGTGCCCG GGTTCCCTGG
CCGGCGCGTG CGATCGTCGC GGCGGGCTGC CTGGCGCTGG GCGCCTTTTC GGTCACGCGG
GCGCATGCCG TCCCGCCGAC GATCAATCTG GGCAACGCGG CCGAGGCCGA GGATGATGCG
TCGTCGGGCG TCTTCGGCTT TCTGTCCAAC TGGCGCCGCT CGGCGAATTT CCTGGGTAAC
ATGTGGGGAC TGCGCCCCGA ACTGGGCAAA TACGGCGCCG TCCTGGCCGT GCAGGAAACG
TCGGAGGTCT TCGGCAACGC CACGGGCGGC AACCGTCGCG GGGTCGATTA TGACGGCCTG
ACCCAAGCCG TGCTGCAGAT CAACACCCAG CGTGCCTTCG GCTGGTACGG CGGCACGTTC
AACGTCAGCA TGGAACAGAT CCACGGCCGC AGCCTCAGCC AGGACAATCT GCAGGCGCTC
CAGACCATCA GCGGCATCGA GGCCGACCGG TCCACGCGGC TGTGGGAATT GTGGTTCGAC
CAGAAATTCC TCGACCAGCA GCAGCTCGAC ATCAAGATCG GCCAGCAGAG CCTCGACCAG
GAATACATGA TCAGCAGCAA CGCGCTGATC TTCGCCAACA CCATGTTCGG ATGGCCGATG
GTGCCGTCGG CCGACCTGCC GGGCGGCGGT CCGGCCTATC CGCTTTCGGC GCTGGGTGTG
CGCGGGAAAT ACTGGCTGGC GACCCCGCTC TATGTGCTGG GCGGGGTCTA TAGCGGTAGC
CCCACCCGCG CGCTGTCGGG CGATCCGCAG CAGACGAACG CGTCCGGCAC CAGTTTCCCG
CTCGATCGCG GTGTCATGGC GATCGCGGAA ATCCAGTATG TCTATCCCGC GCTGGGCGCC
ATGGTCTCGC CGGATGACGA GCAGCCGCTG TCGCATGTCT ATCGCCTGGG CGGGTGGTAC
GATTCCGAAC CGTTCGCCGA CCAGTATTAC GACAATACCG GAACGCCCCT CGCATCGCCG
GCCAGCAACG GTACGCCTGT GAATCATCGC GGTGCCTTCA GCTTCTATGC GGTGATGGAC
CAGATGCTAT GGCGCAGCCA TGTGGACCCC AACCGCACGA TCAACATGTT CGGCCGCGCC
ATGGGCACGC CGCAGGCCGA TCGCGTGCCG GTCGATTTCA GCCTGAACTA CGGCGTGACG
ATGAAGGACC CGTTTCCTTA TCGAACCGAC GACACGTTCG GGCTCGCCAT GGGCTACACC
CATGTCAGCA GCGCGCTGGC GCGCTATGAC CGTGCGGTCC ACCAGTATAC GGGCGTCTAT
TCCCCGCCGC AGGGCGGCGA GACCTATGTC GAGGCGACAT ACCAGTACCA GTTCACCGGG
TGGATGCAGT GGCAGCCGGA TTTCCAATAC ATCTTCAATC CTGGCGGCGG CATCCCGAAT
CCTTCCCATC CCGACCACCA TATCCATAAC GAGCTGGTGC TCGGCTTTCG CACCAACATT
GCGCTTTGA
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| Protein sequence | MSQRPAPLLP TASRRARVPW PARAIVAAGC LALGAFSVTR AHAVPPTINL GNAAEAEDDA
SSGVFGFLSN WRRSANFLGN MWGLRPELGK YGAVLAVQET SEVFGNATGG NRRGVDYDGL
TQAVLQINTQ RAFGWYGGTF NVSMEQIHGR SLSQDNLQAL QTISGIEADR STRLWELWFD
QKFLDQQQLD IKIGQQSLDQ EYMISSNALI FANTMFGWPM VPSADLPGGG PAYPLSALGV
RGKYWLATPL YVLGGVYSGS PTRALSGDPQ QTNASGTSFP LDRGVMAIAE IQYVYPALGA
MVSPDDEQPL SHVYRLGGWY DSEPFADQYY DNTGTPLASP ASNGTPVNHR GAFSFYAVMD
QMLWRSHVDP NRTINMFGRA MGTPQADRVP VDFSLNYGVT MKDPFPYRTD DTFGLAMGYT
HVSSALARYD RAVHQYTGVY SPPQGGETYV EATYQYQFTG WMQWQPDFQY IFNPGGGIPN
PSHPDHHIHN ELVLGFRTNI AL
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