| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2327 |
|---|
| Symbol | glpD |
|---|
| ID | 6975757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2579572 |
|---|
| End bp | 2581122 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643391854 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_002276696 |
|---|
| Protein GI | 209544467 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGCG ACCGTGCCGC GTCCGGTGAC GGACGATCGT ACGACCTTCT GATCATCGGG
GGCGGCGTCA ACGGCTGCGG CATCGCGCGC GACGCCGCCG GGCGCGGGGC GCGCGTCCTG
CTGGTGGAAC AGGACGACCT GGCCGGCCAT ACCTCGTCCG CCAGCACCAA GCTGATCCAT
GGCGGCTTGC GCTATCTGGA ATATTACGAA TTCCGGCTGG TGCGCGAGGC GCTGATGGAG
CGCGAGGTGC TGCTGCGGAT CGCGCCGCAC ATCATCTGGC CGATGCGCTT CGTGCTGCCG
CATTCGAAGC TGGCGCGTCC GGTCTGGGAA CTGCGCGCGG GGCTGTTCCT CTACGATCAC
CTGGCCCTGA CCATGACGCT GCCGCGCACC CGAAGCGTCA CCTTCGCCGA CCATCCCAGC
GGCGCCGTGC TGAAACCCGA ATTCACCCGG GGGTTCATCT ATTCCGACGG CTGGGTGCAG
GACGCCCGGC TGGTGGTCCT GAACGCCATG GACGCCGCCG CCCACGGCGC GGAAATCCGC
ACCCGCACCC GGTTCGTCTC GGCCACGAGG GGCCGCGAGT CGTGGGAGGC CACGATCGCC
GACCAGGAAA CCGGCCGCAC CGGCACCGTC CGGGCGCGCG CGCTGGTGAA CGCCACCGGC
CCCTGGGTCG CCTCGGTGCT GCACGGCACG CTCGGGGTCG GGGGGAACAA GCAGGTGCGG
CTGGTCAAGG GCAGTCACAT CGTGGTGCCG CGCCTGTTCG AGGGATCGCA GGCCTATATC
CTGCAGAATC CCGACCGCCG CATCATCTTC GTCATTCCGT ACGAAAGCCG CTACACCCTC
ATCGGTACGA CCGACATTCC GTGGGACGCG GACCCGGGCA AGGTCGCGAT CTCGCCCGAT
GAAATCACGT ATCTGTGCGA CAGCGTGAAC CGGTATTTCC GCAAGCCCGT CCAGCCGTCC
GACGTCGTAT GGAGCTATGC CGGCGTGCGC CCGCTCTTCG ACGACCGGGC CAGCAGCGCC
TCGGCCGTGA CGCGCGACTA CGTGCTGGAT GTCGATACCG AGGGCGGGGC GCCCGTCCTT
TCGATTTTCG GCGGAAAGAT CACGACCTAT CGCAGGCTGG CCGAACACGC GATCGAAAGG
CTGGCCCCCC ATGTGCGGTC GCTGCGCGCG GTGCCGTGGA CCGGCCTGCA CGCGCTGCCG
GGCGGCGAAT TCGTGGGGCG GAATTTTCTG GGCATGCTGG CGCAGTTGCG GGCGCGGGCA
CCCTGGCTGG ACGAACACAA TGCCTGGCGC CTGATGCGCA ATTACGGCAC GCGGGCCTTC
GACATCGCGG CCGGCGACGC CGCCGCGATG GGCCAGGATT TCGGATCCGG ACTGTACGCG
CGCGAGGTCG ATTACCTGAT CGACCGCGAA TGGGCCCGTT CGGCCGAGGA TATCCTGTGG
CGCCGGTCCA AGCTCGGCCT CCTGTTTTCC GCCGGGCAGG TCGCGGAACT CGAATCCTAT
ATCGCGCATC GCGGCAAGCC CGTGGAATCG CAGGTGGCGG ATGTAGCCTA G
|
|---|
| Protein sequence | MPGDRAASGD GRSYDLLIIG GGVNGCGIAR DAAGRGARVL LVEQDDLAGH TSSASTKLIH
GGLRYLEYYE FRLVREALME REVLLRIAPH IIWPMRFVLP HSKLARPVWE LRAGLFLYDH
LALTMTLPRT RSVTFADHPS GAVLKPEFTR GFIYSDGWVQ DARLVVLNAM DAAAHGAEIR
TRTRFVSATR GRESWEATIA DQETGRTGTV RARALVNATG PWVASVLHGT LGVGGNKQVR
LVKGSHIVVP RLFEGSQAYI LQNPDRRIIF VIPYESRYTL IGTTDIPWDA DPGKVAISPD
EITYLCDSVN RYFRKPVQPS DVVWSYAGVR PLFDDRASSA SAVTRDYVLD VDTEGGAPVL
SIFGGKITTY RRLAEHAIER LAPHVRSLRA VPWTGLHALP GGEFVGRNFL GMLAQLRARA
PWLDEHNAWR LMRNYGTRAF DIAAGDAAAM GQDFGSGLYA REVDYLIDRE WARSAEDILW
RRSKLGLLFS AGQVAELESY IAHRGKPVES QVADVA
|
|---|
| |