| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2311 |
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| Symbol | |
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| ID | 6975741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2561528 |
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| End bp | 2563216 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643391839 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002276681 |
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| Protein GI | 209544452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.34367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0804809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGTC GCGCCGACCG CCGGACGCCC GTTCCTGCCC CGTTCCCGCC CAGGAGGCCG
ACGCTGAGAC CCGATTGCTT TCCGGTGCTT TTCGCTGTTG CGGCCGTCGC GGCGGCAGGC
CTGCCGTCCG CGCACGCGCA GGGCCCGCTT CGGGGCGGGG AACTGATCTA TCTGGACCCC
CAGGCGCATA CCAACCTGTA TCCCCCGGCG GCCGGCTTCT ATCCCAACGG CGGAATCCTG
GACCAGGTCA CCGACCGGCT GACCTGGCAG AACCCGCAGA CGCTGGAAAT CGAGCCCTGG
CTGGCGCAAT CCTGGTCCAG CAACGCCGAC GATACCGAAT ACACCTTCCA CCTGCGCCCG
GGGGTGACGT TCTCGGACGG CACTCCGCTC GACGCGCGGG CCGTCGCCCT GAATTACGAA
ACCTACGGCA AGGGAAACCC GGCGCTTCAT TTCCCGGTTT CCGAGGTCAT TAACAATTTC
GACCATGCCG AAATCCTCGA CCCGCTGACC GTCCGGTTTC ATTTCACCCG TCCGTCGCCG
GGCTTTCTCC AAGGCACGTC TGTCATCGGC TCGGGGATCG TCTCGCCCGC CACCCTGGCG
CATCCGTTCG ACCAACTGGG CGTCGGCACG CAGGTCGTCG GCTCGGGCCC GTTCGTGATC
GTCCGCGACG TTCCGGGCAA GGAGGTCGAT CTGGTGGCGC GGCGCGACTA TGCCTGGCCC
CCGGCCTCGC GCGCGGGGCA GACGCGCGCG TGGCTGGACG GCGTGAAGAT CCTGGTAACG
CCCGAGGACA GTATCCGCGT CGGCGCGCTG CTGGCGGGCC AGGCCGACCT GATCCGCCAG
GTCGAGGCCT ATGACGAGGA ACAGGTCACC CTGGCCGGCT ATCGCCTCTA TGCCCCCTCG
ACGCGCGGGG TGAACACGGG GATCGCCTTC CGGCCGGACA ATCCCCTGGT GGCGGATATC
CGGGTGCGCG AGGCCCTGCT CCACGCCACC GACCGGCAGG AAATCGTCAC CACGCTCTAT
TCCGCCAACT ACCCCCTCGC GCGGTCGGTG CTGTCGGCCC GGGCCGCCGG CTTCCGCGAC
CTGTCCGACC GGCTGGGCTT CGATCCGCGG CGCGCCGCCC AATTGCTGGA CGAAGCGGGC
TGGCGCCTGG GGCCGGACGG GCTGCGCCAT CGGGACGGGC AGACGCTCGC GCTGGGCATC
CACATCTCGC AGCCGCATCC CCAGAACAGG ACGATGCTGG AACTGCTGGC CCAGCAATGG
CGCAGGGTCG GCGTCCAGCT GACCGTCATG TCCGGTTCGG CGGCGGGCGT CATCCTCGAC
AATCTGGACC CGACGCGCAC CCCCGTCACG GTGTCCGAGG TCGGGCGCGC GGACCCGGAC
GTGATGAAGA GCGAATTCTT CCCGTCCAAC CGGGACACGC TTCTGCAAAA GGGCGGCCAG
AGCGCCAAGG TGCGCGCATT CCGTGACGAC CGGCTGGACG CGATGCTGCT GCAGGTCGCC
TCGGACACCG ACCGGCAGGA CCGGCTGCGG CACCTGGGCG ACGTTCAGGA GTATATCGTG
CAAAACGCCT ATACGATCCC GATCTTCGAG GAACCCCAGG TCTATGCCGG GGCGCCCGGC
GTCCACGGCG TCGGCTTCGA GGCCGTGGGC CGCCCCAGCT TCTACGGCAT ATGGCTGGAC
CGGCGATGA
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| Protein sequence | MCGRADRRTP VPAPFPPRRP TLRPDCFPVL FAVAAVAAAG LPSAHAQGPL RGGELIYLDP
QAHTNLYPPA AGFYPNGGIL DQVTDRLTWQ NPQTLEIEPW LAQSWSSNAD DTEYTFHLRP
GVTFSDGTPL DARAVALNYE TYGKGNPALH FPVSEVINNF DHAEILDPLT VRFHFTRPSP
GFLQGTSVIG SGIVSPATLA HPFDQLGVGT QVVGSGPFVI VRDVPGKEVD LVARRDYAWP
PASRAGQTRA WLDGVKILVT PEDSIRVGAL LAGQADLIRQ VEAYDEEQVT LAGYRLYAPS
TRGVNTGIAF RPDNPLVADI RVREALLHAT DRQEIVTTLY SANYPLARSV LSARAAGFRD
LSDRLGFDPR RAAQLLDEAG WRLGPDGLRH RDGQTLALGI HISQPHPQNR TMLELLAQQW
RRVGVQLTVM SGSAAGVILD NLDPTRTPVT VSEVGRADPD VMKSEFFPSN RDTLLQKGGQ
SAKVRAFRDD RLDAMLLQVA SDTDRQDRLR HLGDVQEYIV QNAYTIPIFE EPQVYAGAPG
VHGVGFEAVG RPSFYGIWLD RR
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