Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2242 |
Symbol | |
ID | 6975671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 2486535 |
End bp | 2488211 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643391769 |
Product | thiamine pyrophosphate protein TPP binding domain protein |
Protein accession | YP_002276612 |
Protein GI | 209544383 |
COG category | [G] Carbohydrate transport and metabolism [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTATA CCGTTGGACG CTATCTCGCG GATCGGCTGG CCCAGATCGG GCTGAAACAC CATTTCGCGG TGGCCGGCGA CTACAACCTG GTGCTGCTGG ACCAGCTTCT GCTCAACACC GACATGCAGC AGATCTATTG CAGCAACGAG CTGAATTGCG GGTTCAGCGC CGAGGGCTAT GCCCGCGCCA ACGGGGCCGC CGCCGCGATC GTGACCTTCA GCGTCGGCGC CCTGTCGGCC TTCAACGCGC TGGGCGGCGC CTATGCCGAA AACCTGCCCG TGATCCTGAT TTCCGGCGCG CCGAACGCGA ACGACCACGG CACCGGGCAC ATCCTGCATC ATACGCTGGG CACCACCGAT TACGGCTATC AGCTTGAGAT GGCGCGGCAT ATCACCTGCG CCGCCGAATC CATCGTGTCG GCCGAGGACG CGCCCGCCAA GATCGACCAT GTGATCCGTA CCGCCCTGCG CGAGAAGAAG CCCGCCTATC TGGAAATCGC CTGCAACGTC GCGGGGGCGC CCTGCGTGCG TCCGGGCGGG ATCGACGCGC TGCTGAGCCC GCCGGCCCCG GACGAGGCCA GCCTGAAGGC GGCGGTGGAT GCGGCGCTTG CCTTCATCGA ACAGCGCGGC AGCGTGACGA TGCTGGTCGG CAGCCGCATC CGCGCGGCCG GCGCGCAGGC CCAGGCCGTG GCCCTGGCCG ACGCGCTGGG CTGCGCCGTC ACCACCATGG CCGCCGCCAA GAGCTTCTTC CCCGAGGACC ATCCCGGCTA TCGCGGCCAT TACTGGGGCG AGGTCAGCAG CCCGGGCGCG CAGCAGGCGG TCGAGGGCGC GGAGGGCGTG ATCTGCCTGG CGCCGGTCTT CAACGATTAC GCGACCGTCG GCTGGTCGGC CTGGCCCAAG GGCGACAATG TGATGCTGGT GGAACGCCAC GCGGTCACGG TGGGCGGCGT TGCCTATGCG GGCATCGACA TGCGCGACTT CCTGACCCGG CTGGCCGCGC ATACCGTGCG GCGCGACGCC ACCGCCCGGG GCGGCGCCTA CGTGACGCCG CAGACGCCGG CCGCAGCCCC GACCGCGCCG CTGAACAATG CCGAAATGGC CCGCCAGATC GGCGCCCTGC TGACGCCGCG GACCACCCTG ACCGCCGAAA CCGGCGATTC CTGGTTCAAC GCCGTGCGCA TGAAGCTGCC GTACGGCGCG CGGGTGGAAC TGGAAATGCA GTGGGGCCAT ATCGGCTGGT CGGTTCCCGC CGCGTTCGGC AATGCCCTGG CCGCCCCCGA GCGGCAGCAT GTGCTGATGG TGGGCGACGG GTCGTTCCAG CTGACGGCGC AGGAAGTCGC GCAGATGATC CGCCACGACC TGCCGGTGAT CATCTTCCTG ATCAACAATC ATGGCTACAC GATCGAAGTC ATGATTCATG ACGGCCCGTA CAACAACGTC AAGAACTGGG ATTATGCGGG CCTGATGGAG GTCTTCAACG CCGGCGAGGG CAACGGGCTG GGCCTGCGCG CCCGCACCGG GGGGGAACTG GCCGCCGCCA TCGAGCAGGC GCGCGCCAAC CGCAACGGCC CGACGCTGAT CGAATGCACG CTGGACCGCG ACGACTGCAC GCAGGAGCTG GTCACGTGGG GCAAGCGCGT GGCCGCCGCC AACGCCCGCC CGCCGCGCGC GGGCTGA
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Protein sequence | MTYTVGRYLA DRLAQIGLKH HFAVAGDYNL VLLDQLLLNT DMQQIYCSNE LNCGFSAEGY ARANGAAAAI VTFSVGALSA FNALGGAYAE NLPVILISGA PNANDHGTGH ILHHTLGTTD YGYQLEMARH ITCAAESIVS AEDAPAKIDH VIRTALREKK PAYLEIACNV AGAPCVRPGG IDALLSPPAP DEASLKAAVD AALAFIEQRG SVTMLVGSRI RAAGAQAQAV ALADALGCAV TTMAAAKSFF PEDHPGYRGH YWGEVSSPGA QQAVEGAEGV ICLAPVFNDY ATVGWSAWPK GDNVMLVERH AVTVGGVAYA GIDMRDFLTR LAAHTVRRDA TARGGAYVTP QTPAAAPTAP LNNAEMARQI GALLTPRTTL TAETGDSWFN AVRMKLPYGA RVELEMQWGH IGWSVPAAFG NALAAPERQH VLMVGDGSFQ LTAQEVAQMI RHDLPVIIFL INNHGYTIEV MIHDGPYNNV KNWDYAGLME VFNAGEGNGL GLRARTGGEL AAAIEQARAN RNGPTLIECT LDRDDCTQEL VTWGKRVAAA NARPPRAG
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