Gene Gdia_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2242 
Symbol 
ID6975671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2486535 
End bp2488211 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content69% 
IMG OID643391769 
Productthiamine pyrophosphate protein TPP binding domain protein 
Protein accessionYP_002276612 
Protein GI209544383 
COG category[G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATA CCGTTGGACG CTATCTCGCG GATCGGCTGG CCCAGATCGG GCTGAAACAC 
CATTTCGCGG TGGCCGGCGA CTACAACCTG GTGCTGCTGG ACCAGCTTCT GCTCAACACC
GACATGCAGC AGATCTATTG CAGCAACGAG CTGAATTGCG GGTTCAGCGC CGAGGGCTAT
GCCCGCGCCA ACGGGGCCGC CGCCGCGATC GTGACCTTCA GCGTCGGCGC CCTGTCGGCC
TTCAACGCGC TGGGCGGCGC CTATGCCGAA AACCTGCCCG TGATCCTGAT TTCCGGCGCG
CCGAACGCGA ACGACCACGG CACCGGGCAC ATCCTGCATC ATACGCTGGG CACCACCGAT
TACGGCTATC AGCTTGAGAT GGCGCGGCAT ATCACCTGCG CCGCCGAATC CATCGTGTCG
GCCGAGGACG CGCCCGCCAA GATCGACCAT GTGATCCGTA CCGCCCTGCG CGAGAAGAAG
CCCGCCTATC TGGAAATCGC CTGCAACGTC GCGGGGGCGC CCTGCGTGCG TCCGGGCGGG
ATCGACGCGC TGCTGAGCCC GCCGGCCCCG GACGAGGCCA GCCTGAAGGC GGCGGTGGAT
GCGGCGCTTG CCTTCATCGA ACAGCGCGGC AGCGTGACGA TGCTGGTCGG CAGCCGCATC
CGCGCGGCCG GCGCGCAGGC CCAGGCCGTG GCCCTGGCCG ACGCGCTGGG CTGCGCCGTC
ACCACCATGG CCGCCGCCAA GAGCTTCTTC CCCGAGGACC ATCCCGGCTA TCGCGGCCAT
TACTGGGGCG AGGTCAGCAG CCCGGGCGCG CAGCAGGCGG TCGAGGGCGC GGAGGGCGTG
ATCTGCCTGG CGCCGGTCTT CAACGATTAC GCGACCGTCG GCTGGTCGGC CTGGCCCAAG
GGCGACAATG TGATGCTGGT GGAACGCCAC GCGGTCACGG TGGGCGGCGT TGCCTATGCG
GGCATCGACA TGCGCGACTT CCTGACCCGG CTGGCCGCGC ATACCGTGCG GCGCGACGCC
ACCGCCCGGG GCGGCGCCTA CGTGACGCCG CAGACGCCGG CCGCAGCCCC GACCGCGCCG
CTGAACAATG CCGAAATGGC CCGCCAGATC GGCGCCCTGC TGACGCCGCG GACCACCCTG
ACCGCCGAAA CCGGCGATTC CTGGTTCAAC GCCGTGCGCA TGAAGCTGCC GTACGGCGCG
CGGGTGGAAC TGGAAATGCA GTGGGGCCAT ATCGGCTGGT CGGTTCCCGC CGCGTTCGGC
AATGCCCTGG CCGCCCCCGA GCGGCAGCAT GTGCTGATGG TGGGCGACGG GTCGTTCCAG
CTGACGGCGC AGGAAGTCGC GCAGATGATC CGCCACGACC TGCCGGTGAT CATCTTCCTG
ATCAACAATC ATGGCTACAC GATCGAAGTC ATGATTCATG ACGGCCCGTA CAACAACGTC
AAGAACTGGG ATTATGCGGG CCTGATGGAG GTCTTCAACG CCGGCGAGGG CAACGGGCTG
GGCCTGCGCG CCCGCACCGG GGGGGAACTG GCCGCCGCCA TCGAGCAGGC GCGCGCCAAC
CGCAACGGCC CGACGCTGAT CGAATGCACG CTGGACCGCG ACGACTGCAC GCAGGAGCTG
GTCACGTGGG GCAAGCGCGT GGCCGCCGCC AACGCCCGCC CGCCGCGCGC GGGCTGA
 
Protein sequence
MTYTVGRYLA DRLAQIGLKH HFAVAGDYNL VLLDQLLLNT DMQQIYCSNE LNCGFSAEGY 
ARANGAAAAI VTFSVGALSA FNALGGAYAE NLPVILISGA PNANDHGTGH ILHHTLGTTD
YGYQLEMARH ITCAAESIVS AEDAPAKIDH VIRTALREKK PAYLEIACNV AGAPCVRPGG
IDALLSPPAP DEASLKAAVD AALAFIEQRG SVTMLVGSRI RAAGAQAQAV ALADALGCAV
TTMAAAKSFF PEDHPGYRGH YWGEVSSPGA QQAVEGAEGV ICLAPVFNDY ATVGWSAWPK
GDNVMLVERH AVTVGGVAYA GIDMRDFLTR LAAHTVRRDA TARGGAYVTP QTPAAAPTAP
LNNAEMARQI GALLTPRTTL TAETGDSWFN AVRMKLPYGA RVELEMQWGH IGWSVPAAFG
NALAAPERQH VLMVGDGSFQ LTAQEVAQMI RHDLPVIIFL INNHGYTIEV MIHDGPYNNV
KNWDYAGLME VFNAGEGNGL GLRARTGGEL AAAIEQARAN RNGPTLIECT LDRDDCTQEL
VTWGKRVAAA NARPPRAG