Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2124 |
Symbol | |
ID | 6975551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 2353716 |
End bp | 2355098 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643391653 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002276498 |
Protein GI | 209544269 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAC GCCCGCACGG TTCCGCCCCC CGTCCATTCC GGCACAAACA GGACGACCGG GGGGCCGGGG CCACCGTTGC GGCCAGGGTC GCGGGCGCCG TGGCGGCCCG CGTCGCAGGG GTGGCCGGGC TGGCCGGGCT GCTGGCGGCC TGTGCCGGCA CGCCGGGCCC GCAGATCCCC GTGACGCAGG AAGCCGCGAA TTACCGCGCG CATGCCAAAT CCTACTACGC CCCGCCGGGA CCGCCCGAGG ACCCGTGGGG CCCGTATATC GAGGAAGCGT CCAAGCGTTT CGACGTGCCG GATACGTGGA TCCGCTCCGT CATGCAGCGG GAATCCGGCG GCCAGTTGTT CCGCAACGGC CAGTTCGTGA CCTCGGCCCC CGGGGCGATG GGCCTGATGC AGTTGATGCC CCCCACCTAT GACGAGCTGA AGGGTGAGTA CGGGCTGGGC GACGACCCGT TCAACCCGCA TGACAACATC CTGGCCGGCA CCGCCTATAT CCGGCAGATG TACGACATCT ACGGCTCGCC CGGCTTCCTG GCCGCGTACA ATACCGGACC GGGGCGCCTG GACGATTTCC TGGTCCATAA CCGGACCCTG CCGCGCGAAA CCCGCAACTA TGTCGCCGCG ATCGGCCCGC AGATCGCCGG CATCACGCCC AATGTCCGCT CGCAGGCCGA CCTGATGGTC GAAGCCCACG ACGTGGCGCG CGGCCATGTC TACGCGGCCG CGCAGACCAG CGCGGAAACC CGCTCGGTCC GCATGGCCTG GGCCCGGCGC GCCGACCATG GCGGCACCGA CGATACCCAG CCCGTCCAGG TCGCCGAGGC CCCGCCCGAG ACCGACCGCG CGCCCGCCCC CGCCTATACG GCCTGGAAGA GCGTGGCCCC CGCCGGCGGC GGAACACCGG CCGACGCGGT CCGCGCCGCC TGGGCCGCCC GTGCGCGGCC CGAGGACGAA AGCCCCGCCA CGCCCCCGGC CCTGGCCGCG GCGGCCCCGC CGCTCGCGCC GCTGCCCGCC GCCCCGCCGG CGGCAGGCCC CGCCAGCGGG CACGGCTTCC ACCTGGTCAA CCCGGCGATG GCCGAGCCCG CGCCCCTGCT GCGCCGGTCC AGCCTGGCGC CGGCCCCCCG CGACTGGGCC ATTCAGGTCG GGGCGTTCGG TTCGTCCGCG CTGGCGTCAC AGGCGGCGGG CCATGCCCGC CAGCGCGCCG CCACCGTGCT GGGCGCCGCC CGGCCGCAGG TGGCCAGCGT GCATATCGCC AGCGGGCACC TGTATCGCGC GCGACTGACC GGCCTGTCAC ACGATGCGGC GATCGAGGCC TGCCGCCGCC TGTCGGGCGG CGCGGATAAT TGTGTTGTCA TTTCCCCCGA TTCGCGGTCC TGA
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Protein sequence | MTRRPHGSAP RPFRHKQDDR GAGATVAARV AGAVAARVAG VAGLAGLLAA CAGTPGPQIP VTQEAANYRA HAKSYYAPPG PPEDPWGPYI EEASKRFDVP DTWIRSVMQR ESGGQLFRNG QFVTSAPGAM GLMQLMPPTY DELKGEYGLG DDPFNPHDNI LAGTAYIRQM YDIYGSPGFL AAYNTGPGRL DDFLVHNRTL PRETRNYVAA IGPQIAGITP NVRSQADLMV EAHDVARGHV YAAAQTSAET RSVRMAWARR ADHGGTDDTQ PVQVAEAPPE TDRAPAPAYT AWKSVAPAGG GTPADAVRAA WAARARPEDE SPATPPALAA AAPPLAPLPA APPAAGPASG HGFHLVNPAM AEPAPLLRRS SLAPAPRDWA IQVGAFGSSA LASQAAGHAR QRAATVLGAA RPQVASVHIA SGHLYRARLT GLSHDAAIEA CRRLSGGADN CVVISPDSRS
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