| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2009 |
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| Symbol | |
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| ID | 6975435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2230966 |
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| End bp | 2231760 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643391538 |
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| Product | RNA-binding S4 domain protein |
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| Protein accession | YP_002276384 |
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| Protein GI | 209544155 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.113163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC ACGACGACGA CACGACCCAA CCGGGGCACC CCGACCGGCC CGAACGTGGC
GAGCGCATCG CCAAATGGCT GGCGCGGTCC GGCGTCGCCA GCCGCCGCGA CGCCGAGCGC
CTGGTCGAGG AAGGGCGCGT GCGCCTGAAC GGCGAACCCG TCACCCATCC GGCGACCTTC
GTCGCGGCGG GCGACATCGT GCAGGTGAAC GGCGCGGTGG TCGAGGCGCC CGAACGGACC
CGGCTCTGGC GCTATCACAA GCCGGACGGG CTGGTGACGA CGCACCGCGA CCCCGAGAAG
CGGCCGACCG TGTTCGCCTC GCTGCCGCCG GGCATGCCGC GCGTCATCAG CGTCGGGCGG
CTGGACCTGA ACAGCGAGGG GCTGCTGCTG CTGACCAATG ACGGCGAACT GGCCCGGCGG
CTGGAACTGC CGTCGAACGG CTGGCTGCGC CGCTATCGCG TGCGCGTCTT CGGCGTGGTG
GACGAGGCGC GGCTGGCGGC CCTGGCCGGG GGCAGCGTGT TCGAGGGCGT GCGTTACGGG
CCGATCGAGG CCGGGCTGGA TTCCCGCAAG GGCGACAATG CCTGGCTGAC CGTGGCGCTG
CGCGAGGGCA AGAATCGCGA GGTGCGCAAG GTCATGCGCG GGCTGAACCT GCATGTCAGC
CGGCTGATCC GCACATCCTA CGGTCCGTTC CAGCTCGGCA CGCTGCAGCG CTCGGAACTG
GAGGAAGTGC CGGGCAAGGT CCTGCGCGAG CAGGTGCCCG GACTGGGCCC GGCGCCCCGG
CCCGCCCGCC GGTAG
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| Protein sequence | MTQHDDDTTQ PGHPDRPERG ERIAKWLARS GVASRRDAER LVEEGRVRLN GEPVTHPATF
VAAGDIVQVN GAVVEAPERT RLWRYHKPDG LVTTHRDPEK RPTVFASLPP GMPRVISVGR
LDLNSEGLLL LTNDGELARR LELPSNGWLR RYRVRVFGVV DEARLAALAG GSVFEGVRYG
PIEAGLDSRK GDNAWLTVAL REGKNREVRK VMRGLNLHVS RLIRTSYGPF QLGTLQRSEL
EEVPGKVLRE QVPGLGPAPR PARR
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