Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1968 |
Symbol | rho |
ID | 6975394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 2183180 |
End bp | 2184487 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643391497 |
Product | transcription termination factor Rho |
Protein accession | YP_002276343 |
Protein GI | 209544114 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.6615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTCG CCGAACTCAA GGCCAAAACC CCCGCGGACC TTCTGGCGTA CGCCGAAAGC CTGCAGATCG AGAACGCGTC GTCCCTGCGC AAGCAGGACA TGATGTTCGC CATCCTCAAG ACCCTCGCCG ACAATGATCA GGCGATCCAT GGCGAGGGAA CGCTGGAAAT CCTGCCCGAC GGGTTCGGCT TCCTGCGCTC GCCCGAGGCC AATTACCTGC CCGGGCCGGA CGATATCTAT ATCTCGCCCA GCCAGGTGCG GCGCTTCGGC CTGCGCACCG GCGACACGGT CGAGGGCCAG ATCCGCGCCC CGCGCGACGG CGAGCGCTAT TTCGCGCTGC TGAAGGTCAA CACGATCAAT TTCGAGCCGC CCGAGGCCGT CCGTCACCGG ATCAATTTCG ACAACCTGAC GCCCCTCTAC CCCGAGCGCC GGCTGAAGAT GGAAGTCGAG GCCAACGCCG TGGGCGGCGA GCCCGAGAAG GTCGAGAAGG GCAAGGGCGC CAAGTCCCAG CCCAAGGATT TCACCCCCCG CGTGATCGAC CTGGTCTCGC CGATCGGCAT GGGGCAGCGC GCGCTGATCG TCGCCCCGCC GCGCACCGGC AAGACCGTGA TGCTGCAGAG CATCGCCTCG TCGATTTCCG CCAACCACCC CGAAGTCTTC CTGATCGTCC TGCTGATCGA CGAGCGCCCG GAAGAAGTCA CCGACATGGC CCGCTCCGTC CGGGGCGAGG TCGTGTCCTC GACCTTCGAC GAGCCGGCGA CCCGCCACGT CCAGGTGACG GAAATGGTGC TGGAGAAGGC CAAGCGGCTG GTCGAGCACA AGCGCGACGT CGTCATCCTG CTGGATTCCA TCACCCGCCT GGCCCGCGCC TACAACACCG TGGTGCCGTC ATCGGGCAAG GTGCTGACCG GCGGCGTGGA TGCCAATGCC CTGCAGCGCC CCAAGCGCTT CTTCGGCGCC GCGCGCAATA TCGAGGAAGG CGGATCGCTG ACCATCATCG CCACCGCGCT GATCGATACC GGCAGCCGCA TGGACGAGGT GATTTTCGAG GAATTCAAGG GCACCGGCAA CTCGGAACTC ATCCTCGACC GCAAGCTGGC CGACAAGCGC ACCTTCCCGG CGATCGACAT CACCAAGAGC GGCACCCGCA AGGAAGAATT GCTGGTCGAA CGCTCCGAAC TGTCGAAGAT GTGGGTCCTG CGCCGCATCC TGGCGCCGAT GGGCACGATG GACGCGATGG ACTTTCTGCT GGACAAGCTG AAATACAGCA AGACCAACCG GGATTTCTTC GACGCGATGA ATACCTGA
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Protein sequence | MHLAELKAKT PADLLAYAES LQIENASSLR KQDMMFAILK TLADNDQAIH GEGTLEILPD GFGFLRSPEA NYLPGPDDIY ISPSQVRRFG LRTGDTVEGQ IRAPRDGERY FALLKVNTIN FEPPEAVRHR INFDNLTPLY PERRLKMEVE ANAVGGEPEK VEKGKGAKSQ PKDFTPRVID LVSPIGMGQR ALIVAPPRTG KTVMLQSIAS SISANHPEVF LIVLLIDERP EEVTDMARSV RGEVVSSTFD EPATRHVQVT EMVLEKAKRL VEHKRDVVIL LDSITRLARA YNTVVPSSGK VLTGGVDANA LQRPKRFFGA ARNIEEGGSL TIIATALIDT GSRMDEVIFE EFKGTGNSEL ILDRKLADKR TFPAIDITKS GTRKEELLVE RSELSKMWVL RRILAPMGTM DAMDFLLDKL KYSKTNRDFF DAMNT
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