Gene Gdia_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1897 
Symbol 
ID6975320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2112148 
End bp2112957 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID643391423 
Productaminotransferase class IV 
Protein accessionYP_002276272 
Protein GI209544043 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0193132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC TGTGGCTGAA TGACGGGCTG GTCCCGGCGG ACCGGGCGCG GATCGATCCC 
GCCGATCGCG GCCTGACCCT GGGTGACGGA CTGTTCGAGA CGATGCGCGT CGCGGGGGGG
CGCATCGCCC ATCTGGCCCG GCATCTCGAC CGGCTGTGCC AGGGTGCGGA CCTGCTGATG
TTTCCGGGCC CCGACCTGGA CCGGATCGAG GACGCGTTGC GCCAGGTGGT GCGGCACAAT
GCGCTGGCCG AAGGCGCGCT GCGCCTGACT CTGACGCGCG GCTGCGGCCC GCGCGGCCTG
TTCCCGCCCG CCTCTCCGCA ACCCAGCCTG CTGATCGTGC CCTTTCCCCC GGCGCCCGCC
CCGGGACCGG CCCGCCTGGT GGTCAGCACC CGCGTCCGGC GGGATGCGGC ATCCCCGCTC
TCGCGGGTCA AGAGCCTGAA TTACCTGCCC AACATCCTGG CCCGGCTGGA GGCCGAACAG
CGCGGCGCGG ATGACGCGCT GCTGCTGAAC GCGGCGGGGC GGGTGGCCGA AAGCACGGTC
AGCACGGTGC TGGTCCATCA CCAGGGGCGC CTGGTCACGC CGCCGGTCGG CGACGGCGCC
TTGCCGGGGA TCGCTCGCGC CGTGCTGCTG GCGGCTTGCA TGGTGGAGGA GGCCTCGCTG
ATACCCGACG ATCTGCGGGG GGCAGGGGGT GTGGTGCTGG TCAACAGCCT GTCGGTGCGT
CCGGTTGTCA GTCTGGACGG GATGGCGTTG TCTGTTCTGC CGGGGTTGGT CGAGGACATT
CGGGCGTGTG TACAAGGGCT CAGCCCTTGA
 
Protein sequence
MTMLWLNDGL VPADRARIDP ADRGLTLGDG LFETMRVAGG RIAHLARHLD RLCQGADLLM 
FPGPDLDRIE DALRQVVRHN ALAEGALRLT LTRGCGPRGL FPPASPQPSL LIVPFPPAPA
PGPARLVVST RVRRDAASPL SRVKSLNYLP NILARLEAEQ RGADDALLLN AAGRVAESTV
STVLVHHQGR LVTPPVGDGA LPGIARAVLL AACMVEEASL IPDDLRGAGG VVLVNSLSVR
PVVSLDGMAL SVLPGLVEDI RACVQGLSP