| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1772 |
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| Symbol | |
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| ID | 6975193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1963781 |
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| End bp | 1964638 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643391299 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002276150 |
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| Protein GI | 209543921 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.380088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA AGAGCTTCCT GAGTATCCTG ACGGGATCTT TCTCCACGCC GTGTGCCGAC
AACCCGACGG TCGCCATGAT CGAGGCGGCC TATCGCCATC ACGATATCGA CGCGCGCTAC
ATCAACTGCG ATGTGAAACC CGACAATCTG GCCGATGCCG TTCGCGGCGC GAAGGCGATG
GAATGGGTGG GATTCAATTG CTCGCTGCCG CATAAGGTCG CGGTGATCCA GCACCTGGAC
GCATTGTCCG AGGCCGCGCG GATTATCGGG GCGGTCAACT GCGTGACGAT CCGCGACGGC
AAGCTGACCG GCGACAACAC GGACGGCAAG GGCTTCCTGG CCTCGCTGAA GGACGTCACC
GACCCGCGCG GCAAGAAGAT CCTGCTGCTG GGCGCGGGCG GCGCCGCCCG GGCGATTGCC
GTGGAACTGG GACTGGCCGG CACGGCCCAT ATCACCGTCA TCAACCGCGA CCCGGCGAAG
GCCGAAACCA TCGCGGCGCT GGTGCGCGAC AATACCCGAA GCGACGCGAC CGCGAAGCCA
TGGGACGGCG AGGCGCGCGT CCCGGACGAC GTCGATATCG TCATCAACGC CACCTCGATC
GGCCTGGGCG ACAAGGAGGC CATTCCGCCC ATCGCGCTGG ACAGCCTGAA GAAAGGGCAC
ATCGTCGCCG ACGTGATCCC GAATCCCCCC AGGACACACC TGCTCCGCGA GGCCAAGGCG
CGGGGCTGCA CGCCGCTCGA CGGGCTGGGC ATGCTCGTCA ATCAGGGCGT GATCGGCGTG
GAATTGTGGC TGGGCAAGAC GCTGGATGCC GGCGTCATGA AGCGCGCGCT CCAGGACATT
TTCGGTTCGT CCGACTGA
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| Protein sequence | MTDKSFLSIL TGSFSTPCAD NPTVAMIEAA YRHHDIDARY INCDVKPDNL ADAVRGAKAM
EWVGFNCSLP HKVAVIQHLD ALSEAARIIG AVNCVTIRDG KLTGDNTDGK GFLASLKDVT
DPRGKKILLL GAGGAARAIA VELGLAGTAH ITVINRDPAK AETIAALVRD NTRSDATAKP
WDGEARVPDD VDIVINATSI GLGDKEAIPP IALDSLKKGH IVADVIPNPP RTHLLREAKA
RGCTPLDGLG MLVNQGVIGV ELWLGKTLDA GVMKRALQDI FGSSD
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