Gene Gdia_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1638 
Symbol 
ID6975054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1822299 
End bp1822985 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID643391173 
Productendonuclease III 
Protein accessionYP_002276030 
Protein GI209543801 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.104677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.333144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGT CCCCCCGCCC CGCCTCGGCC CGCCGCCGCA TGACGCTGAA GGAGGTCGAA 
CGCTTCATTA CCCTGCTGGC CGAGGCGCAC CCCGATGCGG CGAGCGAGCT GGATTTCGTC
GATGACTATA CGCTGCTGGT GGCCGTGGCG CTGTCCGCCC AGGCCACCGA TGCCTCGGTG
AACCGGGCGA CGAAGGGGCT GTTCCGCGAC GCCCCCGACC CCGCCGCCAT GGTCGCGCTG
GGCGAGGACG GGGTGGCGGC GCATATCCGC TCGATCGGGT TATGGCGGAC CAAGGCACGC
AATGTCGTCG CACTCTCGCA GGCCCTGCTG GACCAGCATG AGGGCCAGGT CCCCCGCGAC
CGCGCGGCGC TGGAGGCCCT GCCCGGGGTG GGGCGCAAGA CGGCGAACGT GGTGATGAAC
GTGGCGTTCG GCGACAGCAC GATGGCGGTG GATACGCACA TCTTCCGTAT CGGCAACCGC
ACCGGCCTGG CCCCCGGCAG GACCACGCGC GCGGTCGAGG ACCAGTTGGT GGCCCGGATA
CCGGCCCCGC TGCTGCGCCC GGCGCATCAC TGGCTGATCC TGCACGGGCG CTATGTCTGC
AAGGCCCGGC GGCCGGAATG CTGGCGGTGC CCGGCACAGG AACCGTGCCA GTACACGGCC
AAGGTGCTGG TGGCGCCGGC CCGGTAA
 
Protein sequence
MTQSPRPASA RRRMTLKEVE RFITLLAEAH PDAASELDFV DDYTLLVAVA LSAQATDASV 
NRATKGLFRD APDPAAMVAL GEDGVAAHIR SIGLWRTKAR NVVALSQALL DQHEGQVPRD
RAALEALPGV GRKTANVVMN VAFGDSTMAV DTHIFRIGNR TGLAPGRTTR AVEDQLVARI
PAPLLRPAHH WLILHGRYVC KARRPECWRC PAQEPCQYTA KVLVAPAR