Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1638 |
Symbol | |
ID | 6975054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 1822299 |
End bp | 1822985 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643391173 |
Product | endonuclease III |
Protein accession | YP_002276030 |
Protein GI | 209543801 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.104677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.333144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGT CCCCCCGCCC CGCCTCGGCC CGCCGCCGCA TGACGCTGAA GGAGGTCGAA CGCTTCATTA CCCTGCTGGC CGAGGCGCAC CCCGATGCGG CGAGCGAGCT GGATTTCGTC GATGACTATA CGCTGCTGGT GGCCGTGGCG CTGTCCGCCC AGGCCACCGA TGCCTCGGTG AACCGGGCGA CGAAGGGGCT GTTCCGCGAC GCCCCCGACC CCGCCGCCAT GGTCGCGCTG GGCGAGGACG GGGTGGCGGC GCATATCCGC TCGATCGGGT TATGGCGGAC CAAGGCACGC AATGTCGTCG CACTCTCGCA GGCCCTGCTG GACCAGCATG AGGGCCAGGT CCCCCGCGAC CGCGCGGCGC TGGAGGCCCT GCCCGGGGTG GGGCGCAAGA CGGCGAACGT GGTGATGAAC GTGGCGTTCG GCGACAGCAC GATGGCGGTG GATACGCACA TCTTCCGTAT CGGCAACCGC ACCGGCCTGG CCCCCGGCAG GACCACGCGC GCGGTCGAGG ACCAGTTGGT GGCCCGGATA CCGGCCCCGC TGCTGCGCCC GGCGCATCAC TGGCTGATCC TGCACGGGCG CTATGTCTGC AAGGCCCGGC GGCCGGAATG CTGGCGGTGC CCGGCACAGG AACCGTGCCA GTACACGGCC AAGGTGCTGG TGGCGCCGGC CCGGTAA
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Protein sequence | MTQSPRPASA RRRMTLKEVE RFITLLAEAH PDAASELDFV DDYTLLVAVA LSAQATDASV NRATKGLFRD APDPAAMVAL GEDGVAAHIR SIGLWRTKAR NVVALSQALL DQHEGQVPRD RAALEALPGV GRKTANVVMN VAFGDSTMAV DTHIFRIGNR TGLAPGRTTR AVEDQLVARI PAPLLRPAHH WLILHGRYVC KARRPECWRC PAQEPCQYTA KVLVAPAR
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