Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1396 |
Symbol | |
ID | 6974804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1556624 |
End bp | 1560046 |
Gene Length | 3423 bp |
Protein Length | 1140 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643390926 |
Product | glucose/galactose transporter |
Protein accession | YP_002275791 |
Protein GI | 209543562 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.866269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGACCC CGTCCGTGAC CAGTCCGGCC GGCGCCCATG GCTGGCGCCC GATCGTCATC ATGGCGATCC TGTTCTTCAG CATCGGCTTC GTCACCTGGC TCAATGGGCC GCTGATCACC TTCGTGCAGC TTGCCTTCAA CCTCAGCGAT GTCGCGGCGT TCCTGGTTCC GGCCTGTTTC TACCTGGCCT ATTTCGTGTT TCCCATTCCC GCCACCCTGC TGGCGCGCCG CACCGGGCTG AAAGCCGGCA TGGCGGTCTC GCTGATGGTG ATGGCGGGCG GGACGGCGCT GTTCGGCGAA TGCGTGACCG CGCGCTGGTA TCCCGGCGCG CTGGCCGGGC TGGGGGTCAT CGGCGCCGGC CTGTCGCTGC TGCAGGTGAC GATCAACCCC TATGTCAGCC TGCTGGGCCC GCATGCCCGC GCGGCGCAGC GCATCGCCAT CATGGGCACG GCGAACAAGT GCGCGGGCAT CGTCGCCCCG CTGGTGTTCG CCGGGCTGGT CATGCGCGAT ATCGGCGGCA TCGCGGCGCA GGTCCGCGCC GCGCCGTCGG CGGCGGCGCG TGACGCCGTC CTCGCCCGTT TCACCCATGC GGTGCATGCG CCCTATCTGG CCATGGCGGT GCTGCTGCTG GGGTTGGCGG TATGGATCCT GCGCGCGCGC CTGCCATCCA TCGCCATCGG CCGGGAGGAC ACGGCCGACG CGGCCGGCCA TGCGGAGGGG CCGGCGCGGG GCGGCGTTCC CCTGCTGTGC CTGGGCGTGT TCAGCACGTT CCTCTATGTC GGGGTAGAGG TCATGGCCGG CGACGCGATC GGGATGTACG GGCGCGGATT CGGCCTGTCG CTGGACGTCA CCAAATATTT CACCGCCCTG ACCCTGGCGG CGATGATGGC GGGCTACCTG GCGGGCATGG CCGTGGTGCC GCGCCTGGTC TCGCAACTGC AGTACATGGG TCTGTCCTGC GGGCTGGGGC TGGTGCTGTG CGGGGCGGCG TGGGTCAGCA GCGGGCTGGT CTCGGTCCTG TGCGTGGCGC TGCTCGGCTT TGCCAACGCC ATGATCATGC CGGCGCTGTT TCCGGTGGTC ATGCGCATGA TGGACCGGCA TGCCGACCGC GCGGCGGCGC TTCTGGTGAT GGCGTTCTCG GGCGGGGCGG TGCTGCCGCA GGTCTTCGTG CATCTGGCGC AGACCCGCGG GGCGCACGCC GCCTTCGTGC TGGTCGCGGC CCCGTCCTAT CTGGTGATCC TGGCCTATGT CGGCCTGATG CGGCGGCGGA CGGCGATTGC CGGTCCGGGG GCCGGTGGCG GCATGGCGGG CGGCGTGGCG GCCGCGGCGC TGGGCGCGGT GCTGGCCGTG GCGCTGCCGG CGGGGCAGGC GCGGGCGGCG GCCCCGGCGC TGATGCCGCT GCCCGCCTCG GCGCATTATT CCGGCCAGAC CCTGTCCCTG GCCAACGGCC TGGCCGTGCA GTGGGACCAT GCGCCGACAC CCCTGCTGCG CCGCGCGGCC GATCGGCTGA GGGCACGCCT GGACCGGCTG GCCGGCCGGG TGCTGCCGGC CGACGACCAC GCGGCGGGGG CCGCGATGCT GCGGGTCCGC TACGGGGCCG ATCCGTCCTT CCTCGCCCTG GGCGAGAAGG AGCAGTACCA CCTGGCCGTC CGTCCGGACG GCATCACGCT GGACGCCGCC GGTCCCGCCG GGGTGCTGGA CGGGTTCGCC ACCCTGGCGC AACTGGCGGC GCAGGGGCCG CAGGGCCCGG TGCTGATGCA GGCCGATATC GACGACCGGC CGCGCTTTCC CTGGCGCGGC ATCATGATCG ACGTCTCGCG CCACTTCATG CGCATCGAGA CCCTGCATCG GCAGATCGAC GCGATGGAAC AGGTGAAGCT GAACGTGCTG CACCTGCATC TGGGCGATTC CCAGGGATTT CGGGTCGAAA GCCGGCTGTT CCCAGGCCTG CAGCGGCAGG GGTCGCATGG CCAGTTCTAT ACCCAGGCCC AGATCCGCGA CCTGGTCGCC TACGCCGCCG ATCGCGGCGT GCGCATCATG CCGGAATTCG ACACGCCCGG CCACGCGCTG GCCATCCTGC TGGCCTATCC CGCGCTGGCG GCCCAGCCGG TCGATCCGGC CATGGCGGAC CCCGACGACG CGGCGCTGAA CCCGACGCTG GATGCCACGC TGCACTTCGT CACGCAGCTA TACGGCGAAA TGGGGCGCCT GTTCCCGGAT CGCTATTTCC ATGCCGGCGG CGATGAGGTG CAGGCCGAAC AATGGACCCG CAATCCGAAG ATTACGGCGT TCATGAAGGC CCACGGCTTC GCGGACACCG CGTCGCTGCA GGCGGCCTTT ACCGCGCGGG TGCAATCCGT GCTGGCCCGC CAGGGCAAGA TCATGGTGGG CTGGGACGAG GTCAGCGCGG CCCCGATTCC CAAAAGCGTG GTGGTCGAGG CCTGGCGGTC GTCCAAATTC ATCGGCACCG CCACCCGGGC GGGCCACCCG GTCGTGGTCT CGGCCGGCTA TTATCTCGAC CTGCTGAACC CGGCGGAGCA GCATTACCGG GTCGATCCGC TGGACGTGCA GGCCAGCGGC CTGACCCGCG CGCAGGCCGA TATCAAGCGC GTGACGATGG GCCCCCTGGT GGACGCCTTC ACGCTCGACC CCGCCCTGCC GCCGCTGGAC GCCGCGCAGA AGAAGCTGGT GCTGGGCGGC GAGGCCCCGC TGTGGAGCGA ACTGGTCACG GACGAAACGC TGGATGCGCG CCTGTGGCCG CGCGCCGCCG CCATAGCCGA GCGGTTCTGG TCGCAGCCGC AGACCCGCGA TGTCGATGAC ATGGACCGTC GCCTGGCGGA GGTGGCGAAC CGCCTGGAGG TGACCGGCCT GCAGGCGCGG GCGAACGCCT ATCGGATGCA GGCCCGCATG GCGCCCGCCG ATCCCGGGGC GGTCGCCTGC CTGATGGGTG CCGTGATGCC GGTGCGCAAT TACGCCCTGA ACAGCTTCGT CCGGCGCAGC GGCCAGGTGC GGTTCGACGA ACTGGCGGAA ATCGCATCCC CCGACCCCAT CGCCGCGATG CGGTTCAACG CGCTGGCCGC GCGCTTCGCC GCCGGGGATC GCGGCGTGGC GGAGGCGTTG CGGGCGCAAC TCGGCGCGTG GGCCGCGTGC GGGGATCGCT TCGCCACGGT CGCGCAGGGC GTGGGCGCGC TGGAACAGGG CCTGCCGGTG GCGCGGGACA TCGCGGCCCT GGCCCGCATC GGGCTGGCCG CCCTGTCCGG CCCCCTGGAC GACGCGCAGC GGCGCGATGC CGTGGCACGG ATCGCAGCCG ACCAGGCGGT GGTCGAGTCG TTTGCCGGCG TGGTGCGGAC CCACGGCGTG AAACCGCCGC CCGCCGGGCT GCTGGTGGCG ATCCTGCCCG GGATCAGGTC CCTGATGGGG TAG
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Protein sequence | MTTPSVTSPA GAHGWRPIVI MAILFFSIGF VTWLNGPLIT FVQLAFNLSD VAAFLVPACF YLAYFVFPIP ATLLARRTGL KAGMAVSLMV MAGGTALFGE CVTARWYPGA LAGLGVIGAG LSLLQVTINP YVSLLGPHAR AAQRIAIMGT ANKCAGIVAP LVFAGLVMRD IGGIAAQVRA APSAAARDAV LARFTHAVHA PYLAMAVLLL GLAVWILRAR LPSIAIGRED TADAAGHAEG PARGGVPLLC LGVFSTFLYV GVEVMAGDAI GMYGRGFGLS LDVTKYFTAL TLAAMMAGYL AGMAVVPRLV SQLQYMGLSC GLGLVLCGAA WVSSGLVSVL CVALLGFANA MIMPALFPVV MRMMDRHADR AAALLVMAFS GGAVLPQVFV HLAQTRGAHA AFVLVAAPSY LVILAYVGLM RRRTAIAGPG AGGGMAGGVA AAALGAVLAV ALPAGQARAA APALMPLPAS AHYSGQTLSL ANGLAVQWDH APTPLLRRAA DRLRARLDRL AGRVLPADDH AAGAAMLRVR YGADPSFLAL GEKEQYHLAV RPDGITLDAA GPAGVLDGFA TLAQLAAQGP QGPVLMQADI DDRPRFPWRG IMIDVSRHFM RIETLHRQID AMEQVKLNVL HLHLGDSQGF RVESRLFPGL QRQGSHGQFY TQAQIRDLVA YAADRGVRIM PEFDTPGHAL AILLAYPALA AQPVDPAMAD PDDAALNPTL DATLHFVTQL YGEMGRLFPD RYFHAGGDEV QAEQWTRNPK ITAFMKAHGF ADTASLQAAF TARVQSVLAR QGKIMVGWDE VSAAPIPKSV VVEAWRSSKF IGTATRAGHP VVVSAGYYLD LLNPAEQHYR VDPLDVQASG LTRAQADIKR VTMGPLVDAF TLDPALPPLD AAQKKLVLGG EAPLWSELVT DETLDARLWP RAAAIAERFW SQPQTRDVDD MDRRLAEVAN RLEVTGLQAR ANAYRMQARM APADPGAVAC LMGAVMPVRN YALNSFVRRS GQVRFDELAE IASPDPIAAM RFNALAARFA AGDRGVAEAL RAQLGAWAAC GDRFATVAQG VGALEQGLPV ARDIAALARI GLAALSGPLD DAQRRDAVAR IAADQAVVES FAGVVRTHGV KPPPAGLLVA ILPGIRSLMG
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