| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1284 |
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| Symbol | |
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| ID | 6974689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1427206 |
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| End bp | 1429044 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643390813 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002275681 |
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| Protein GI | 209543452 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGTT TTCACCTCGT ATGCACGGCC GCGTTGGCCA TCGTAGCACC GCTGGCGGCC
GTGCCCGCCG GCGCGTGGGC GGCGGCCCCC GCTCCGTCCA TGCAGCCCCC TGCCGTGACG
GTGGCGGCGG CGCCGTGGCC GGACGGGTTG TCGGGGTCCA TGCTGGTGGC CACCGTCGCG
GCGCTGGAAG GCGACGACGC CGTCGCGGCG TCGGCCTTCC GCCAGGCCTA TGGGCTCGAC
CCCTCCCGGC CCGTCCTGCT GCGGCAGGCG TTCCTGTACA GCGCGCTGGC GGGCGACGAT
GCGGCGGCCG GCCTGGCGGC GCGCCTGCCG GGGCAGTTGA TGGCCGAACT GGTCATGGGC
AATGACGCGG TCCGGGTCGG ACGCTGGTCG GACGCGAAGG CGCATTACGA CCGGGTGCAG
CAGGATGCGA TGCTGGCGGC GATCCGCCCG TTGCTGGATG CCTGGACCCT TCTGGGCGCC
GGCCAGCCCG ACCGGGCGCT GGCGATCATC GACCCCTGGA CCGCCGACCG GGTGCTGGGC
CGCTATTATG CCGTCCATGC GGCGCTGATC GCCGATCTCG CGGGACAGCA TGACCGGGCC
GACCGGTATT ATCGTCTGGC CCTGGACGCA TCGCCGGGCC GCGACCTGTT TTCCACCTGG
GCCCTGGGGC ACTGGCTGAT CGCCCAGGGC CATCGCGCCC AGGCCACGCG GCTGCTCGAC
AGCCTGGTGG CCGGCGGGGC CGGCCTGTCG CTGGCGCGTG ACGGCGTGCT GGCCGCGATG
GACCGCCCAC CGGTCACGTC ACCGCGCCAG GGTATCGCGC AGGCCTATGC GTTCCTCTCC
GCCCTGATCG GGCAGGAGGC CGAGCGCATA CCCGACCCGA CCGGACGGCT GGCCCATGAT
GCCGGCGTGC GCGACATGCG CATGCTGCTG CTGCGATTCG CCCTGGCGCT GGACCCGGGT
TTCGGCCAGG CGCGGCTGCT GCTGTCCGCG CTGCAGTATG ACGGCGGCCA GGCGGCGGCG
GCCCGCGATA CTATCGTGGC GCAGGCGCGT GATGGTGGCG TGGCGCAGGC GTTTCCCCAC
GACCCGCTGG CGACGGTCAT GCAGGTGCAG GTCGCGCGCC TGGACGCCGC GACGGGCCGG
GGGGACGATG CGATCCGCAT CCTGACCGAC CTGGCCCGCG CGCAGCCTGC GCAGGCGCAG
ATCTGGCAGA CGCTGGGCGA CATCCAGTCC GGGCGCGAGG ACTGGGCCGG GGCCGCCGTG
TCCTTCAGCC GGGCGATCAC GGCCACGGGC CGGCTGTCGG GCGACGACTG GGAAATCCTG
TTCGGCCGTG CCGTCGCCTA TGACCGGCTG GCCCGCTGGC CGCAGGCCCA GGCCGACCTG
GAACACGCGC TGGCCCTCGC CCCCAACGAG GCGCTGCTTC TGAACTATCT GGGCTATTCC
TGGGTCGAGC ATGACCGGAA CCTGCCGCAG GCCGAAGCCC TGCTGCGGCA CGCCGTCGCG
GTCGAGCCGC AGAACGCGGC GATTCGCGAC AGCCTGGGCT GGGCGCTGGT GCGTCAGGGC
CGCATCGCCG AAGGGCTGGC CCTGCTGGAA CGCGCGGCGG AACAGACGCC GGAGGACCCG
GCCGTCAATT ACCATCTGGG CGTGGCCTAC TGGAAAGCCG GCCGCCCGCG TGAGGCCGTC
AATCAATGGC ATGTCGCGCA GGCCCTGCCC GCCGCCGATC CGTCGGACGT GCAAAAGATC
ACTGCCGCCC TTGCGGATGC CGCCCGATCG GGCCACGAAG ACCCGCCGCC CGACCAGGAC
GGGGCGGCCC GGAAGAAGGA CCCATCCGAC CGTGACTGA
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| Protein sequence | MQRFHLVCTA ALAIVAPLAA VPAGAWAAAP APSMQPPAVT VAAAPWPDGL SGSMLVATVA
ALEGDDAVAA SAFRQAYGLD PSRPVLLRQA FLYSALAGDD AAAGLAARLP GQLMAELVMG
NDAVRVGRWS DAKAHYDRVQ QDAMLAAIRP LLDAWTLLGA GQPDRALAII DPWTADRVLG
RYYAVHAALI ADLAGQHDRA DRYYRLALDA SPGRDLFSTW ALGHWLIAQG HRAQATRLLD
SLVAGGAGLS LARDGVLAAM DRPPVTSPRQ GIAQAYAFLS ALIGQEAERI PDPTGRLAHD
AGVRDMRMLL LRFALALDPG FGQARLLLSA LQYDGGQAAA ARDTIVAQAR DGGVAQAFPH
DPLATVMQVQ VARLDAATGR GDDAIRILTD LARAQPAQAQ IWQTLGDIQS GREDWAGAAV
SFSRAITATG RLSGDDWEIL FGRAVAYDRL ARWPQAQADL EHALALAPNE ALLLNYLGYS
WVEHDRNLPQ AEALLRHAVA VEPQNAAIRD SLGWALVRQG RIAEGLALLE RAAEQTPEDP
AVNYHLGVAY WKAGRPREAV NQWHVAQALP AADPSDVQKI TAALADAARS GHEDPPPDQD
GAARKKDPSD RD
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