| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1247 |
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| Symbol | |
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| ID | 6974652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1385664 |
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| End bp | 1387202 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643390777 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002275645 |
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| Protein GI | 209543416 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTA CTGTGTTCGG GGCGGCGGTC GTGCTGTCCA TATCCGGCCT GATGCTATCC
GACGGGTCCG CTCGCGCGCA GTCCACCCGG TCCGACGTCG CGGCGACCAC GCGGCCGGTC
GTGGTGGGCG GCTATGCGAA CCGGGTCCCG GCGCGGATCG TCCCCCCTCC CGCCTCGAAG
CAGGCCGTCC CGGCATCCAC CGCCTCGAAA CAGGCCGCGG CGGCGCACGT CTATGTGCCC
CCGTCCTCGC TGGCGGGCTA TTTCCCGCCC AGCTACGAGG AATGGATTCG CGGCAGCACC
ATGACGGGCG ACTGGGGGGG GCTGCGTACC CATCTGGAAG ATCGCGGCGT GCATATCCAG
GGGCATTTCC TGGAAGACGC GTCCGGCAAT CCGGTGGGCG GAAAATATGC CGGTGTCCGC
TATGCGCATG AATTCGGGCT GGGCGCCGAC ATCAATTTCG CCAGGCTGAT CCATCATGAC
ATCGGCGTCC TGCATATTCT GCTGACCGAA CGCGCGGGCC TCAGCCTGGC GGCGGGCCCG
CTGGGCGGCG CGGTGGATTC CGTGCAGCAG ATCTTCGGCT CGGGCGAGAC CGTGCGCATC
ACGCGCCTGT CGCTGGAAAA GCAGTTCAAT CGCTACGTCT CGATGGAAGC CGGCTGGATC
AACACCGAAA ACGATTTCGG GCAGTCCACC ATGCATTGGG GCATGTCGAT CTACTGCCAG
TTCCAGACCA ACGCGATCTG CGGCATGCCG CAGGGGCTGG CGATGAATGG CGGCTATGGC
TGGTATCCCA CGGCCCATCC GGGCGCGTGG CTGAAGCTCT ATCCGGCCGG CAACGACCAT
TATCTGGTGT CGGCGGGTAT CTATAACGTC GATAACACCA TCTCGAACAC CCATAACGGC
TTCAAGCTGG GACTGGACGA TACGACGGGC GTCTACCTGC CGTTCCAACT CGGCTGGCAT
CACGGCAACG ACTACACCGG CGACATGGAC GGCAATATCC GCATCGGCGG ATACTGGGAC
ACGTCCGAGG TCCCGATCGT CACCTCCAAG GCCGGGGCCT ATCAGCCGGC GAGCGTCGAG
TTGATCGACC TGCCGACCAC CCAGATCCGC GGCCGCTTCG GCGGCTGGTT CGAAGGCGAC
CAGATGATCC AGCGCGACAG TTCCGGCAGC GGCCGGGGCA CGGTCATTTT CGGATCGTTC
ATCTGGGGCG ATCCGCGCAC CGCGCTGTCG CCGTATTTCG CGACCTGGGG CATCATCCGC
AAGGGAACGC TGCCCAACCG TCCGAACGAT ACGATCAGCT TCGGCGGCAA GATCGCGGTG
CTGAATCCGA AGATGGCGCA ATATGCGGGC ATGCTGCAGC AGGAAGGCCA GAAGGCGATC
CGTCCCTCGA ACGAACCGGC CATCGAACTG AACTATGGCT GGCGGCCGAC CCCGTGGGCC
ACGTTGCGCC CCGGCCTGCA ATATGTCTGG CACCCGGGCG GCACCAATCG CTACGCCAAC
GCCTTCATCA TAGACATGGA AACCGGATTA ACCTTCTAA
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| Protein sequence | MIRTVFGAAV VLSISGLMLS DGSARAQSTR SDVAATTRPV VVGGYANRVP ARIVPPPASK
QAVPASTASK QAAAAHVYVP PSSLAGYFPP SYEEWIRGST MTGDWGGLRT HLEDRGVHIQ
GHFLEDASGN PVGGKYAGVR YAHEFGLGAD INFARLIHHD IGVLHILLTE RAGLSLAAGP
LGGAVDSVQQ IFGSGETVRI TRLSLEKQFN RYVSMEAGWI NTENDFGQST MHWGMSIYCQ
FQTNAICGMP QGLAMNGGYG WYPTAHPGAW LKLYPAGNDH YLVSAGIYNV DNTISNTHNG
FKLGLDDTTG VYLPFQLGWH HGNDYTGDMD GNIRIGGYWD TSEVPIVTSK AGAYQPASVE
LIDLPTTQIR GRFGGWFEGD QMIQRDSSGS GRGTVIFGSF IWGDPRTALS PYFATWGIIR
KGTLPNRPND TISFGGKIAV LNPKMAQYAG MLQQEGQKAI RPSNEPAIEL NYGWRPTPWA
TLRPGLQYVW HPGGTNRYAN AFIIDMETGL TF
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