Gene Gdia_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1149 
Symbol 
ID6974553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand- 
Start bp1285440 
End bp1287104 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content66% 
IMG OID643390678 
Producthydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit 
Protein accessionYP_002275547 
Protein GI209543318 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.691464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.943485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCGT CATCCACCCC CCCCAAACCA CCCCTCAAGC CGTTCGTCTA CGGCCCGCTC 
TTTCCGGGCC ATGACGACGA TACGCCCTGG AAGAAGCTGG AGATCGAGGG CGTGCACACC 
ACCGTGTGCG ACGGCCGCAC CGTTCTGCAT GTCAGGCCCG AGGCACTGAG CGAACTGGCC 
GCCCGGGCCT TCCACGACAT CGCCCACCTG CTGCGTCCGG GGCACCTGGC GCAGCTGGCC 
AAGATCCTGA AGGACCCCGA GGCCTCGGAC AATGACCGGT TCGTGGCGCT GGACCTGCTG 
AAGAACGCCT GCATCGCGGC GGGCGGCGTG CTGCCGATGT GCCAGGATAC CGGCACCGCC 
ATCGTCTACG GCAAGAAGGG CCAGCGCGTC TGGGTCGACG GGAACGAGGA GGAAGCGTTC 
TCGCGCGGGG TGTACGACAC CTATACCCGC ACCAGCCTGC GCTATTCGCA GATGGCGCCG 
CTGTCGATGT TCGAGGAAGT GAACACCGGC ACCAACCTGC CGGTGCAGTT CCATATCTCG 
GCATCGCCCG GCGATTATCA TTCCGAACAG ATGGACCTGA TGTTCGTCGC CAAGGGCGGC 
GGGTCGGCCA ACAAGACCTT CCTGTTTCAG GAAACCCGCG CCCTGCTGTC CAGCAAGGAA 
GACCTGCTGA AATGGCTGGC CGTCAAGGTG CGCACGCTGG GCACCTCGGC CTGCCCGCCC 
TATCACCTGG CCGTGGTGAT CGGCGGCATG TCGGCCGAAC AGACCCTGGA AACGGTGAAG 
CTGGCCTCGA CGCACTGGCT GGACACCCTG CCCACGCAGG GAAGCCCGCT GGGCCATGCC 
TTCCGCGACC TGGAGATGGA GCAGGAGGTC CTGAAGCTGA CCCAGTCCCT GGGAATCGGC 
GCGCAGTTCG GCGGCAAGTA TTTCTGCCAT GACGTGCGCG TGGTGCGCCT GCCGCGCCAC 
GGGGCGTCGC TGCCGGTGGG GATCGGCGTG TCCTGCTCGG CCGACCGGCA GATCAAGGCG 
CGCGTCACCG CCGACGGGTT CTTCCTGGAA CAGCTCGAAA CCGACCCCGC GCGCTTCCTG 
CCCGAGACGA CGGACGAGCA TCTGGGCGGC GAGGTGGTGC AGGTGGACCT GAACCAGCCG 
ATGACCGAAA TCCGCGCGCA ATTGTCGCGT TATCCGGTCC GTACGCGCCT GTCGCTGACC 
GGCACCGTGG TCGTGGCGCG CGACATCGCC CACGCCAAGT TCCGCGAGCG GCTGGAACGC 
GGCGAGGGGC TGCCGCAATA CCTGAAGGAC CATCCCGTCT ATTATGCCGG CCCGGCCAAG 
ACGCCCGACG GGCTGCCGAC CGGCTCGTTC GGTCCCACCA CGGCCGGTCG CATGGACAGC 
TATGTCGCCA TGCTGCAGGA AGCCGGCGGG TCGTTCGTCA TGCTGGCCAA GGGCAACCGG 
TCCAAGGCGG TGCGCGACGC CTGCCATGAA TATGGCGGCT TCTATCTCGG CTCGGTCGGC 
GGGCCCGCGG CCCGGCTGGC CAAGGACTGC ATCCGCAAGG TCGAGGTCCT GGAATATCCG 
GAACTGGGCA TGGAAGCGGT GTGGAAGATC GAGGTGGAGA ATTTCCCCGC CTTCATCGTC 
ATCGACGATA AGGGTAATGA TTTCTACGAA GGCCTGACGG GCTGA
 
Protein sequence
MNASSTPPKP PLKPFVYGPL FPGHDDDTPW KKLEIEGVHT TVCDGRTVLH VRPEALSELA 
ARAFHDIAHL LRPGHLAQLA KILKDPEASD NDRFVALDLL KNACIAAGGV LPMCQDTGTA 
IVYGKKGQRV WVDGNEEEAF SRGVYDTYTR TSLRYSQMAP LSMFEEVNTG TNLPVQFHIS 
ASPGDYHSEQ MDLMFVAKGG GSANKTFLFQ ETRALLSSKE DLLKWLAVKV RTLGTSACPP 
YHLAVVIGGM SAEQTLETVK LASTHWLDTL PTQGSPLGHA FRDLEMEQEV LKLTQSLGIG 
AQFGGKYFCH DVRVVRLPRH GASLPVGIGV SCSADRQIKA RVTADGFFLE QLETDPARFL 
PETTDEHLGG EVVQVDLNQP MTEIRAQLSR YPVRTRLSLT GTVVVARDIA HAKFRERLER 
GEGLPQYLKD HPVYYAGPAK TPDGLPTGSF GPTTAGRMDS YVAMLQEAGG SFVMLAKGNR 
SKAVRDACHE YGGFYLGSVG GPAARLAKDC IRKVEVLEYP ELGMEAVWKI EVENFPAFIV 
IDDKGNDFYE GLTG