| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1135 |
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| Symbol | |
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| ID | 6974539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1272557 |
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| End bp | 1274164 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643390664 |
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| Product | protease Do |
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| Protein accession | YP_002275533 |
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| Protein GI | 209543304 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGA CCGTTCCGGT TTTCTTCCGT CCCTGTGCCG CCGTCGGGCT GGCGGCGGCC
CTGTCCCTGA TCGCGGGGGG GGGCCTCCGG GCCGAACCGG CGGTGGTGCC GCATCCGGTC
GCCCCAGCCG CGCCCGCCGC CCCTGCGGTC CCGCCCGTTA CCGTGCCGCC GGTCCACCTG
CCCGCGCCGG GGCGCGGCGC GCCCGACAGC TTCGCGGACC TCGCGGCGCG GCTGCTGCCC
GCCGTGGTCA ACGTCTCGAC CACCGAGACG GTCAAGCCCG GGGACCAGGA CGGCGATTCC
GACGGTGATG GTGGGGGCGA GGATACGCCC CAGGTCCCCA ATTTCCCCGA GGGATCGCCG
TTCGAGAAAT TCTTCCACGA TTTCATGAAC CGGCAGACCG GGCCCGAGGC CGCGCCGCGC
AAGATGCAGG CGCTGGGGTC GGGCTTCATC ATCGACCCGT CGGGGATCGT CGTCACCAAC
AACCACGTCG TCCGCCACGC GGACCAGATC ACGGTGACGC TGCAGGACAA TACGGTGCTC
AAGGCGCATT TGCTGGGCCA TGACGACCGG ACCGACCTCG CGGTGCTGAA GGTCGATGCG
CCCCATCCGC TGCCCGCCGT GCCCTTCGGC GACAGCGACC ATGCGCGTGT GGGCGACTGG
GTGCTGGCGA TCGGCAATCC GTTCGGCCTG TCGGGCACGG TGACGGCCGG CATCATCTCG
TCCCGCGGCC GCAATATCGA ACAGGGTCCG TACGACGATT TCATCCAGAC CGACGCCCCG
ATCAACAAGG GCAATTCCGG CGGTCCGCTG TTCGACATGC AGGGGCAGGT GATCGGCATC
AACACTGCGA TCTATTCGCC CTCCGGCGGG TCGATCGGCA TCGGCTTCTC CATTCCCTCG
GCCGAGGCGC GGGGCATCAT CGACCAGCTC CGCCGCACCG GCAAGGTGTC GCGTGGCTGG
ATCGGCGTGC GGATCCAGGA CGTGACCCAG GACATCGCCG ACGGGCTGGG CCTTAAGGTC
GCGCGCGGCG CCCTGATCGC GGGGATCGAG CCCAAGGGCC CGGCGGCGGC GGCGAAGCTG
CAGACCGGCG ACGTGATCCA GACCCTGGAC GGCAAGGAGA TCGACGGCCG CGCCCTGCCG
CGCCTGATGG CCGACGAATC CCCCGGCCGG GTGGTCAGCC TGGGGGTGTG GCGCCATGGT
CATGTCCTGA CTGTTCCCGT CACGGTCGGC GCCCTGCCCG AGGAAGCGGC CGAGGCCCCG
GCGCCCAAGC CCGCCGCCAC GGCCCAGGGC AACGTTCAGT TGCAGGGCAT GGGCTTCACC
GTGGGGGCGA TCGACGACGT CGCCCGGCAG AAATACAGCC TGGCCGAGGG GCAGAAGGGC
GTGGTCGTCA CCGCGGTGGC CGCCGACGGC CCGGCCGCCG ATCGCGGCCT GCGCCCCGGC
GACGTGATCA CCGAGGTCCA GCAGTCCGAG GTCGCGTCCC CCGCCGACCT GCGCCGCCTG
GTCGAGGCGG CGCGCGCGCA GCATCGGCGT TCGGTCCTGT TCCTGGTGCA GAACGGCGAC
GGGCTGCGCT GGGTGCCGCT CCCGCTGGTC GGAGGGGACG GGAAATAG
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| Protein sequence | MPLTVPVFFR PCAAVGLAAA LSLIAGGGLR AEPAVVPHPV APAAPAAPAV PPVTVPPVHL
PAPGRGAPDS FADLAARLLP AVVNVSTTET VKPGDQDGDS DGDGGGEDTP QVPNFPEGSP
FEKFFHDFMN RQTGPEAAPR KMQALGSGFI IDPSGIVVTN NHVVRHADQI TVTLQDNTVL
KAHLLGHDDR TDLAVLKVDA PHPLPAVPFG DSDHARVGDW VLAIGNPFGL SGTVTAGIIS
SRGRNIEQGP YDDFIQTDAP INKGNSGGPL FDMQGQVIGI NTAIYSPSGG SIGIGFSIPS
AEARGIIDQL RRTGKVSRGW IGVRIQDVTQ DIADGLGLKV ARGALIAGIE PKGPAAAAKL
QTGDVIQTLD GKEIDGRALP RLMADESPGR VVSLGVWRHG HVLTVPVTVG ALPEEAAEAP
APKPAATAQG NVQLQGMGFT VGAIDDVARQ KYSLAEGQKG VVVTAVAADG PAADRGLRPG
DVITEVQQSE VASPADLRRL VEAARAQHRR SVLFLVQNGD GLRWVPLPLV GGDGK
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