| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1115 |
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| Symbol | |
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| ID | 6974519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1252199 |
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| End bp | 1253629 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643390644 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002275513 |
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| Protein GI | 209543284 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.967056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.588415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCA CTTTTTCGCG CACGCGCCCC AGCCTTGCCT GGCGCATCTG GATCATGGCG
GCCGTAGCCG TCCTTTCCTG CCATCCCGCC CGCGCGCAAT ATCGTGGTCC GGTCGCGGAA
ACCGCCCCGT CCTTCTCGCT CGATACCCCC ACATCGTACG CGAACACCCC GTTCACCCCG
CCGGTTGAAC ACATGGTTTC AGCCTGGGGC AACGCCGTCC AGAACCTCAA CCGCAAGGGA
ATCGGCCTGG TCATCGACTA TACCAGCGAA AGCGCACTGG CGCTCGATGC CGGCAATGCC
GGGGACGCAG GCTATGCACA CCAGATCGGC GTACAGTTGG ACCTGGATTG GGACAAACTG
GTGGGCTGGC GCGGCTTTGT GACCCATGCG GCCATCGTCA ATCGGGCGGG CCATAACATG
GCCGCCGATT TCGGTGACAG GTCACTCAAC GGATTCCAGG AGATCTATGG CGGCGGCGGC
AATACGGCCG TTCACATGGT CTATGTCTAT GGCACGCAGA ACCTGTTCCA CGACCGCGTG
CAGATCGCGA TCGGCAAGCT GCCGGTCAAT ATCGACTTTT CCGCGTCCCC CCTGTTCTGC
ACGTTCATGA ACAAATCCAT GTGCGGAAAC CCCAAATCCC TGACCCGCGG CGCCGCGGGT
TTCGGCACCT ATCCGGGTTC GACCTGGGGG ACGCGCGTAC GCTACTGGCC CATGCACGGG
GTCTACGCGC AGGCCGGACT GTACGGCGTC AATCCGGACC TCAATACCAA TCGGTATGAC
CGCACCGGAT TCAACTTCAA CACGAATCTC TATACCGGCG TCTACGTTCC GGTCGAGGTC
GGCCTGATCC CGTCCTTCGG CAGGAACCAG CTTGTCGGTC ACTACAAGGT CGGCGTCGCC
TACGATTCCT CGAACTACGC CGACAATTAC TACGATGTTA ACGGCGCCCC CCTGGCGCTG
ACGCGCAGGG CCGCGCGGAT GGACACCGGC AAGACGCAGC TCTGGATCGA AGGCGACCAG
ATGCTGATCC GCAACGGCCA TGGCCCGCTC AACGGATTCT ATGTCATGGC CGGCCTGGTG
CGTAACACGC CGGAAAGCAG CCCGTACCTC TATCAATATT ATTTCGGGAT CGTGGACCGG
GGCTTCTGGC GCGCGCGCCC CGACGACACG TTCGGCATCG AGGTCTCGCG GGCCACGGCC
AGTCCGGACC TTGTCGATAC GCAATGGCTC GATTACGCAG CGGGGCGCAA GCTGCCGGCC
AATGCCACCT ATCCGCAAAG CCATATCAGC GTGCTGGAAG CCACCTACAA CATCCACGTC
TGCGAGGGGC TCTCGATCCA GCCGGACTAC CAGCGGATCA TGCGGCCCAA CCTGCAGCGC
AACAAACCCG CGATCGACGC GATCGGCCTG AAGATCCACG CGACGCTCTG A
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| Protein sequence | MRITFSRTRP SLAWRIWIMA AVAVLSCHPA RAQYRGPVAE TAPSFSLDTP TSYANTPFTP
PVEHMVSAWG NAVQNLNRKG IGLVIDYTSE SALALDAGNA GDAGYAHQIG VQLDLDWDKL
VGWRGFVTHA AIVNRAGHNM AADFGDRSLN GFQEIYGGGG NTAVHMVYVY GTQNLFHDRV
QIAIGKLPVN IDFSASPLFC TFMNKSMCGN PKSLTRGAAG FGTYPGSTWG TRVRYWPMHG
VYAQAGLYGV NPDLNTNRYD RTGFNFNTNL YTGVYVPVEV GLIPSFGRNQ LVGHYKVGVA
YDSSNYADNY YDVNGAPLAL TRRAARMDTG KTQLWIEGDQ MLIRNGHGPL NGFYVMAGLV
RNTPESSPYL YQYYFGIVDR GFWRARPDDT FGIEVSRATA SPDLVDTQWL DYAAGRKLPA
NATYPQSHIS VLEATYNIHV CEGLSIQPDY QRIMRPNLQR NKPAIDAIGL KIHATL
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