| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1028 |
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| Symbol | |
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| ID | 6974425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1160845 |
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| End bp | 1161546 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643390550 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002275426 |
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| Protein GI | 209543197 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.100392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCG GTAAATTGAG GCTCCGGCTG CTCGGTGTCG TGCTTCCGGC CGTCGTTTCA
TTGACGGTGC CGACGCATAA TGCGGTTGCC GATCCCTACG CCGACATGAT CGCGGAAGCA
GCCACACGCG CGCAGATTCC GGCGTCATGG ATTGCTGCCG TGCTGCACGC CGAGAGCAGA
GGCGATGCGC GGGCGGTGTC ATCGGCGGGT GCGATGGGGC TCATGCAGGT GATGCCCGGC
ACATGGTCCA GCCTGCGCAC ATCGCTCGGC CTTGGCGACG ATCCGTTCGA CCCGCACGAT
AATATTCTGG CAGGAGCGAC CTATCTGCGC TGGATGCGGG ATCGCTACGG CGAGGCCGGG
TTTCTCGCCG CCTATAATGC CGGTCCCGCG CGCTATGACG AGCATCTGGC GACCGGCCGG
CCGCTGCCTG CCGAGACGCG GAACTACGTC GCGTCGGTCA GCGCGCGGCT GGCCCTGCCG
CTTGCCGATG ACATCGCAAT CAGTGCTTCG GCGGCACCAT CCTGGCAGGG CTCTTCCCTC
TTCCCGGCGT CATTCCTGCG CATAGGAAAT GCCCACCGGC ATGTCGGGAG CGCGCACGAT
CCGGTGCATG CCGATGGCGA TCGCCCGAGC GACTGGACGG CACTCGCCCC GCAATCGGTG
GGGCTGTTCA TCGCGTCAGG GCATGGGGAG GCGAACCGAT GA
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| Protein sequence | MTGGKLRLRL LGVVLPAVVS LTVPTHNAVA DPYADMIAEA ATRAQIPASW IAAVLHAESR
GDARAVSSAG AMGLMQVMPG TWSSLRTSLG LGDDPFDPHD NILAGATYLR WMRDRYGEAG
FLAAYNAGPA RYDEHLATGR PLPAETRNYV ASVSARLALP LADDIAISAS AAPSWQGSSL
FPASFLRIGN AHRHVGSAHD PVHADGDRPS DWTALAPQSV GLFIASGHGE ANR
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