| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1023 |
|---|
| Symbol | |
|---|
| ID | 6974420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1154211 |
|---|
| End bp | 1156193 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643390545 |
|---|
| Product | conjugal transfer coupling protein TraG |
|---|
| Protein accession | YP_002275421 |
|---|
| Protein GI | 209543192 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA CCAAGATCCT CTGGGGATCG GTGTGTGCGG TAAGCACCGT GATCCTCGCC
TTTACCTGGG CCGCGACGCA GTGGACTGCC TGGCGGCTCG GCTTCCAGCC GCAGCTTGGC
GCGCCGTGGG TCACGCTGCT CGGCTGGCCG GTTTATTACC CGCCGGAGTT CTTCTGGTGG
TGGTTCGCCT ACGACGCCTA CGCTCCGGAC ATCTTCACGA TGGGCGGGTA TATCGCGGCG
GCAGGCGGTG TGGCCGCCGT CATCATCGCG ATCACGATGT CCGTCTGGCG CGCTCGTGAG
AAGAAACGCG CCACCACCTA TGGCTCGGCG CATTGGGCCG ATCCGCGTGA GATCCGTCGG
GCGGGACTGC TCGCCCCCGA TGGGGTGGTG CTGGGCCGCT CGGCCGATGT CTATCTCCGC
CATGACGGGC CGGAACATGT GCTGTGCTTT GCACCGACCC GCTCGGGCAA GGGCGTCGGG
CTGGTGGTGC CGACGCTGCT GACGTGGCCG GGCTCCGCCA TCGTCCATGA CATCAAGGGA
GAGAACTGGA CGCTGACCGC CGGCTGGCGC TCGCGCTTCG GCCGGGTGCT GCTATTCGAT
CCGACTAATC TGGCCAGCGC CGCCTACAAT CCGCTGCTGG AAGTCCGGCG CGGTGAGCGG
GAGGTCCGCG ACGTGCAGAA TATTGCAGAC GTGCTGGTCG ATCCCGAAGG CGCCCTGGAG
AAGCGGAACC ACTGGGAAAA GACCAGCCAT GCGCTGCTGG TCGGCACGAT CCTGCATGTC
CTCTATGCCG AGGAGGACAA GACCTTGGCC GGGGTAGCCA ATTTCCTCTC CGACCCGAAA
CGCGCCATCG AGACCACGCT ACGCGCCATG ATGACCACGC CGCATCTCGG GGCGAAGGGC
GTGCATCCGG TCGTTGCCAG TTCGGCGCGC GAACTGCTCA ACAAGAGCGA CAATGAACGC
TCCGGCGTGC TGTCCACCGC CATGTCGTTT CTCGGCCTGT ATCGCGATCC GGTCGTGGCG
CATGTGACGC GGCGCTGCGA CTGGCGCATC CGCGATCTTG TCGCCGGCAG CCATCCGGCC
ACACTCTATC TGGTGGTCCC GCCTTCGGAC ATCAGCCGCA CCAAGCCGCT GGTAAGGCTC
GTACTGAACC AGATTGGCCG CCGACTGACG GAGGAACTGG AGGCGAAACG ACGCCATCGG
CTGCTGCTGA TGCTCGATGA ATTCCCGGCG CTCGGGCGGC TGGATTTCTT CGAGAGTGCG
CTGGCCTTCA TGGCGGGCTA CGGTATCAAG AGCTTCCTGA TTGGCCAGAG CCTGAACCAG
ATCGAGAAAG CGTATGGGCA GAACAATTCT ATCCTCGACA ACTGCCATGT CCGGGTCAGC
TTCGCCACAA ATGATGAGCG GACCGCCAAG CGCGTATCGG ATGCGCTCGG CACCGCGACC
GAGATCCGGG ATGCGAAAAA CTATGCCGGG CATCGGCTGT CGCCGTGGCT CGGGCATCTG
ATGGTGACAC GCCATGAGAC CGCGCGGCCT TTGCTCACGC CCGGCGAAAT CATGCAGCTT
TCCCCAGACG AGGAACTGGT GCTGGTCTCG GGTTGTCCGC CGGTCCGGGC GCGCAAGGCG
CGGTATTTCG AAGATGCAGA ATTGGCCGCG CGCATCCTCC CGCCACCCCG GTTCGAGCCA
CCGCCATCTC CCGAAGGAAC GCCGCCCATC AGGCCGCAGC CGCCAGGGGA CTGGGCTGAT
GTGGTCCAGC CGCTTCCTGC CGGGAATGCG GATGATGATC CCGCCAATGC CGGCATCCGC
CGTGAGCCGG AACTGCCGGA ACAGGAAGAG GTGGTGCAGG CACCGAGGAA GCCGGTGCAT
GAATTTGATC CGCCGGAGGA TGAACCCGAG GACGATGCGA AGCGGGCACA GACCTTGCGG
TGCGGTGAGC GGGGTCTCGC GCGTCAGGTT TCGCTCGATC CTGGCGATCG GATGGGGCTA
TGA
|
|---|
| Protein sequence | MNQTKILWGS VCAVSTVILA FTWAATQWTA WRLGFQPQLG APWVTLLGWP VYYPPEFFWW
WFAYDAYAPD IFTMGGYIAA AGGVAAVIIA ITMSVWRARE KKRATTYGSA HWADPREIRR
AGLLAPDGVV LGRSADVYLR HDGPEHVLCF APTRSGKGVG LVVPTLLTWP GSAIVHDIKG
ENWTLTAGWR SRFGRVLLFD PTNLASAAYN PLLEVRRGER EVRDVQNIAD VLVDPEGALE
KRNHWEKTSH ALLVGTILHV LYAEEDKTLA GVANFLSDPK RAIETTLRAM MTTPHLGAKG
VHPVVASSAR ELLNKSDNER SGVLSTAMSF LGLYRDPVVA HVTRRCDWRI RDLVAGSHPA
TLYLVVPPSD ISRTKPLVRL VLNQIGRRLT EELEAKRRHR LLLMLDEFPA LGRLDFFESA
LAFMAGYGIK SFLIGQSLNQ IEKAYGQNNS ILDNCHVRVS FATNDERTAK RVSDALGTAT
EIRDAKNYAG HRLSPWLGHL MVTRHETARP LLTPGEIMQL SPDEELVLVS GCPPVRARKA
RYFEDAELAA RILPPPRFEP PPSPEGTPPI RPQPPGDWAD VVQPLPAGNA DDDPANAGIR
REPELPEQEE VVQAPRKPVH EFDPPEDEPE DDAKRAQTLR CGERGLARQV SLDPGDRMGL
|
|---|
| |