| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1013 |
|---|
| Symbol | |
|---|
| ID | 6974410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1139516 |
|---|
| End bp | 1140484 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643390535 |
|---|
| Product | P-type conjugative transfer ATPase TrbB |
|---|
| Protein accession | YP_002275411 |
|---|
| Protein GI | 209543182 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGTTG CTCCTTTCCG CTCTGAAGCC GTCGCCCGAG GCACGCGCAT GCTGCGCACC
GCCCTCGGCC TGGCCATCGC CGGGCATCTC GACGATCCGT CAATCGTCGA AGTGATGCTC
AATCCCGACG GCCGGTTGTG GATCGACCGG CTGGCCGGCG GGATGGAAGA CACCGGCACC
CGGATCACAC CCGCCGACGC CGAGCGGATC GTCCGTCTTG TCGCCCATCA TGTCGGGGTC
GAGGTCCATC CCGCCAGCCC CCGCGTCTCC GCCGAACTGC CCGGAAGTGG GGAGCGGTTC
GAGGGGCTGG TGCCCCCGGT GGTAGCGGCG CCCTGCTTTG CGATCCGACG CCCCGCGGTC
GCGGTGTTCT CGCTCGACGA TTATGTGGCC GCCGGCATCA TGACCGCCGC ACAGGCCGCG
TTTCTGCGTC GCGCGGTGAT GGAGCGGCAA AACATCCTCG TCGCAGGCGG CACCTCCACC
GGCAAGACCA CCCTGGTCAA CGCCCTGCTG GCTGAGATCG CGCAAACCGG TGATCGAGTG
GTGCTGATCG AGGATACGCG CGAACTGCAA TGCGCGGCGC CCAATCTGGT CGCTTTGTGC
ACCAGGGACG GCGCCGCCTC ACTCTCCGAT CTGGTGCGCT CCTCGCTGCG GCTGCGTCCG
GACCGGATCC CGATCGGCGA GGTGCGCGGC GCCGAAGCGC TCGACCTGCT CAAGGCCTGG
GGCACCGGCC ATCCCGGCGG TGTCGGCACC CTGCACGCCG GGTCTGCGAT CGGCACTCTG
CGCCGGTTGG AGCAGTTGAT CCAGGAAGCC GTCGTCACCG TCCCGCGCGC CCTGATCGCC
GAGACCATCG ACGTGATCGC GGTCCTGTCC GGGCGCGGCA GCGCGCGTAG GTTGGCCGAA
CTCGCCACCG TCCAGGGCCT GTCCCCGGAC GAGGACTACA TCCTCGCATC TGCCGGAGAT
TTGTCATGA
|
|---|
| Protein sequence | MSVAPFRSEA VARGTRMLRT ALGLAIAGHL DDPSIVEVML NPDGRLWIDR LAGGMEDTGT
RITPADAERI VRLVAHHVGV EVHPASPRVS AELPGSGERF EGLVPPVVAA PCFAIRRPAV
AVFSLDDYVA AGIMTAAQAA FLRRAVMERQ NILVAGGTST GKTTLVNALL AEIAQTGDRV
VLIEDTRELQ CAAPNLVALC TRDGAASLSD LVRSSLRLRP DRIPIGEVRG AEALDLLKAW
GTGHPGGVGT LHAGSAIGTL RRLEQLIQEA VVTVPRALIA ETIDVIAVLS GRGSARRLAE
LATVQGLSPD EDYILASAGD LS
|
|---|
| |