Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0891 |
Symbol | |
ID | 6974288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1011093 |
End bp | 1011875 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643390419 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002275295 |
Protein GI | 209543066 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.375615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGTAC AGGGAGCACG CCCGGACAAT TCGCCATCTG GGCGCATCCA GGACAAGGTT GCCGTGATCA CCGGTGCAGC CAACGGCATG GGCCGCGCGA CGGCGGAACG TTTCGCGGCC GAGGGCGCGA AACTGGTCCT GGCCGACCTC GACAGGGAAA AGCTGGAAGC CCTGGTGGCC GAGATCGCGG GGCGCGGTAT TCAGGTGACA GGCGTGCCCG GCGACGTCAG CCGCGAGGCC GACATGCAGG CTCTGATGGA TGAAGCCGTC GCGCATTTCG GCCGGATCGA TATCCTGATC GCCAATGCCG GTATCATCCC GGAGGCCGAC CTCGCGTCCG CCACCGTCGA TCTGTGGGAC CACACGATGG CTGTCGACGG ACGCGGCATG TTCCTCAGCT GCAAATATGC CGCGGCCGAA ATGGTAAAGG CGGGAAAGGG GGCCATCGTC TGCCTGTCGT CGATTTCCGC CTTTGCGGGA CAGAAAGGCC AGGCTGTGTA CGGCCCGGCG AAATTCGTGG CGTCCGGGTT GACCAAGCAC CTCGCCATCG ACCTTGCCGA CAAGGGCGTG CGCGTCAACG CCGTGGCCCC GGGTACGATC GACACGCCCG CCGTGGCCAA GCTGGGCAAG GAGGGCATCG CGAAAGTGGT CGCCATGCAC CCGCTGGGCC GCATGGGAAA GCCAGAAGAA GTCGCCAGCG CGATCCTGTT CCTGGCATCG GACGAGGCAT CCTTCATCAC GGGTGCCGTC CTGCCGGTGG ATGGTGGATA TCTCGCCCAG TAA
|
Protein sequence | MPVQGARPDN SPSGRIQDKV AVITGAANGM GRATAERFAA EGAKLVLADL DREKLEALVA EIAGRGIQVT GVPGDVSREA DMQALMDEAV AHFGRIDILI ANAGIIPEAD LASATVDLWD HTMAVDGRGM FLSCKYAAAE MVKAGKGAIV CLSSISAFAG QKGQAVYGPA KFVASGLTKH LAIDLADKGV RVNAVAPGTI DTPAVAKLGK EGIAKVVAMH PLGRMGKPEE VASAILFLAS DEASFITGAV LPVDGGYLAQ
|
| |