| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0854 |
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| Symbol | |
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| ID | 6974251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 971180 |
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| End bp | 972637 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643390383 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002275259 |
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| Protein GI | 209543030 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.648225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CAATCTCTTT TTCCCGTACC GTGGCGTGTG GCGCCCTGCT GTCCGTATGC
ACGGGTTTTG CCGTGTGTGC CGCGACCGGG GCCATGGCGC AGACCTCTCT CAATCCCAGC
GTCCGGGTCG CGACCCCGCT GAACCAGGTC AATTTCGGTG CGACGTCGGT GCCCCCGCTG
CCCCAGCCCG AGGCGCTGTG GCCGGACCCG TTCGGCTGGA ATACGTGGCT TCGCGATCGC
GGCGTTGCGT TCCTTCTGGA TAACGTCAAC GAATTCGCGG GAAATGTCGG AAGCGTGACG
CCCGGATACG GCCTGCGCAA GGGCAGTTCC AACGCGGGCC AGTACGCATT CGAAAATGAT
ACGGACTGGG AGCGCCTTGC GGGACTGACG GGCTTCAGCA CGCACGCGAT CGTCGTCGGT
CGTTACGGTA TTCCGGCCAG CCGCATGTTC GGTGACAACG TGGCCCCCAG CCAGGAAATC
TATGGTGCCG GCGGCAACGT GGTCGTGCAC TTCGTGTATG GATACGGGGA AGAGACGTTG
TGGCAGGGCC GCTTCGATGT CGCGGCCGGG CGCATTCCGT TCCTGAACGA TTTCTCGTCC
AACCCGCTGT ACTGCAATTT CATGAACAAT GCGTTCTGCG GTAACCCCAA GGCGTCTTCC
GACAACACCG CCCATTCGTC CTATCCGGAT TCGAACTGGG CCGTCCGGTT CCGGGTCCGT
CCGACCACCG ATACGTATTT CCAGACCGGC GTCTATTTCG ACCAGGCCGG TATCTACGGC
AATACGCAGT ATCGCACCGG CTTCAAGCTC AACGGCGCCG ATATCAACGG CGAATCGATG
CCCATCGAAT TCGGCTGGGA ACCGGTCTTC GGTCACGGGA CGCTGCCCGG CCATTACAAG
ATCGGCTACG CACGCGATAC GGTGGACCAT CAGGACGTCT ATTATGACGG CTATGGCGAT
GCCTGGGCGT TGACCGGCCT GCCGCGTCGG CGGGACCATG GTGCGAACGC CGCATGGTTC
CTGGCCGACC AGATGCTGTA TCATTTCAAG GGCGGGGCCA AGGATGCGGG CGTGACCTTC
CTGGGCGGCT TCTATTACAA CGACGAAGAT ATCTCGATGC GCTCGCAGCA GTACCAGGCC
GGTTTCCTCG CCCGGGGATT CTGGAAGGCG CGGCCGCTCG ATGGTGCCGG CATCAATTTT
GCCTATATCC GTGAGTCGGC GCTGGCGGCC AAGACCCAGG AACTGCAACT GCAGCAGGGA
ATTCTGCCCG GCAACCTGCT GAACGGGGCC TATGGCCCGC AATCCTACGG CATGAACCTG
GAAGTGGACT ATCAGATCCA CGTCTATCGG GGCATGACGA TTGCCCCGGA TTTCCAGTAT
TACTTCAATC CGGGTGGCCA GCGCGTGCTG CGTGACACCG CCGTGCTGGG GTTCAAGACC
CATATCGAAC TGTTCTGA
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| Protein sequence | MKKTISFSRT VACGALLSVC TGFAVCAATG AMAQTSLNPS VRVATPLNQV NFGATSVPPL
PQPEALWPDP FGWNTWLRDR GVAFLLDNVN EFAGNVGSVT PGYGLRKGSS NAGQYAFEND
TDWERLAGLT GFSTHAIVVG RYGIPASRMF GDNVAPSQEI YGAGGNVVVH FVYGYGEETL
WQGRFDVAAG RIPFLNDFSS NPLYCNFMNN AFCGNPKASS DNTAHSSYPD SNWAVRFRVR
PTTDTYFQTG VYFDQAGIYG NTQYRTGFKL NGADINGESM PIEFGWEPVF GHGTLPGHYK
IGYARDTVDH QDVYYDGYGD AWALTGLPRR RDHGANAAWF LADQMLYHFK GGAKDAGVTF
LGGFYYNDED ISMRSQQYQA GFLARGFWKA RPLDGAGINF AYIRESALAA KTQELQLQQG
ILPGNLLNGA YGPQSYGMNL EVDYQIHVYR GMTIAPDFQY YFNPGGQRVL RDTAVLGFKT
HIELF
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